Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00384 ATGATCAGAATTCGCCAACTTTCACATTTATTTTACCTCTCCCTGCTCTTAGTTCTGGTCATTGAAGCTGAGGGCTCAAATACAGCTGATATAGCTATATACTGGGGCCAAAACGGAAATGAGGGAAGCTTAACAGAAACATGTGCAACGGGAAGATATGCGTATGTGAACATAGGTTTCCTCACAACATTTGGGAGTGGTCGGATCCCACAAATCAACTTGGCAAACCACTGCAATCCTGTGAACAACGGGTGTAACGTCATTAGTGCAGGCATTAGAGACTGCCAGAATCAAGGAATCAAAGTGTTCTTATCTATGGGTGGCGCTGCTGGAAATTATTCCCTGGCTTCTACTGAGGATGCTAAGGTCGTTGCTGATTACGTTTGGAACAATTTCCTAGGTGGAACCTCTTCCACAAGACCACTGGGGGATGCCATCTTGGATGGAATAGATTTTGACATAGAGAACTCCACAGATCATTGGGATGACCTTGCGCGTTACATTAAAGATTACAGCAAGACAGGCCAAACTGTGTACTTATCTGCAGCACCTCAATGCCCATTTCCTGATGGGCACTTAAGTACTGCACTTGTTACCGGCCTTTTCGACTATGTCTGGGTACAATTCTACAATAATCCTCAATGTGAATACGTTCAGAAAGACACAAGTCTATTTACGAGGTCATGGAACCAGTGGACAACATTGAGAGCAAGCAAAATATTTCTGGGCTTGCCTGCAAGTCCAGCAGCAGCTTCAAATGGTTATGTTCCAGAAGATGTATTGATTTCTGAAATCCTTCCTTTGATAGAGACGTCGCCAAACTTTGGGGGTCTCATGTTGTGGTCAAGGTTTGAAGATCTACAATCTGCATATGGTGACACTGTGAGAATCAATACTCTCTGCAAACAGGACAAGCAAGCTATATGCAAGAGAAACGGTGATGAATTTGTTCAAAGTTACGGTACCATGTCTACCATTGGTTTCAACATGTTTGATGGAGCTGAGGACAACACTTCAAGCTGTTGTGAAACCATATGCTGGAATACTTGTACTTGTGTTGCCTATTCTCCCATAAATTCTGTAAATAACACTGGATGCAAGATATGGAATGAAGGATCAAGCTTTCAGAGTGCCTCAGGACCTGAAGAGCAGCTTATTTTTGTCCTTAAACGAAAAGAGCAAAATAAATGGTGGCTAGGGCTTCTTTTGGTAGCAGGAGTAGTTGTTGCATTGGCACTATCATACATAGCCTATAAGATATGGACAAAAAAAGATGGAAAAGTTGACAATGACATGATGGAGAAAGCGGAACCACTAGAGGATGGTTATGATGAAGTGCCAACTGCTACACAAGGCAAATGGAAAGCAAGCAGTAAAAAAAGTGAGGCAACAGATAAGATGCTGATATTCAGCTTTGGTAGCATTGTGGGAGCAACAGAAAATTTCGCATTGCATAATAAGCTTGGAGAGGGTCGCTTCGGACCTGTTTACAAGGGGAAATTAGCTGATGGGCAGAAAGTAGCAGTAAAGAGAGTTGCACAAAGTTCAGTGCAGGGACTAGAGTTCAAAAACGGAACGAAGTTCATGGCTAAACTCCATCATCCTAACCTTGTAAGCCTGCTTGGTGTCTGCATTGAAAGAGACGAAAGAATACTAGTAAATGACTATATCTCTAGCAAAACCTTGGATTTCTACATATTCGACAAAAGAAAGAAGACTGTATTGGACTGGACAAAACGTTTTCGGATTATTGAAGGAATTGCTCAAGGTCTGCTTTATATGCATGTACATTCAAGATTCAAAGTGATACATGGAGACCTGAAGGCAAGAAATATCTTGCTCGATGCCGATATGAACCCGAAAATATCTGATTTTGGAGTGGCGGGAATACTTGGTTTTCAAGATTCTGAAGATAACACAAACAGGATCGTTGAAAGATATGGATACATGCCCCCAGAGTATACTACTAGTGGCATTTTATCAATCAAAACAGATGTTTTCAGTTTTGGTGTACTAGTGCTAGAGATTGTGAGTGGGAAGAAGAACAACAGCCGTCATCATTCTCATGGCCAACTCAATCTGATAGCATATGGATGGCAGTTGTGGATTGAAGGCAGTCCATTAGATCTACTAGACACTATATTGGATGTGTCATGTGCACCAGATGAAGTTCTCAGATGCATTCACATTGGCCTTATGTGTGTGCAAGACAAAGCCGACGATAGACCTACCATGCAAAATGTCATTTCTTTTCTCTTAGATGAAGATACCAAGATTTCTAATCCGAACACTCCTGCATTTCTCGGCAATCGAGCACTCACTTCGAATAATTATGGAGAAGAATCTGGAAGATAG 2355 0.417 MIRIRQLSHLFYLSLLLVLVIEAEGSNTADIAIYWGQNGNEGSLTETCATGRYAYVNIGFLTTFGSGRIPQINLANHCNPVNNGCNVISAGIRDCQNQGIKVFLSMGGAAGNYSLASTEDAKVVADYVWNNFLGGTSSTRPLGDAILDGIDFDIENSTDHWDDLARYIKDYSKTGQTVYLSAAPQCPFPDGHLSTALVTGLFDYVWVQFYNNPQCEYVQKDTSLFTRSWNQWTTLRASKIFLGLPASPAAASNGYVPEDVLISEILPLIETSPNFGGLMLWSRFEDLQSAYGDTVRINTLCKQDKQAICKRNGDEFVQSYGTMSTIGFNMFDGAEDNTSSCCETICWNTCTCVAYSPINSVNNTGCKIWNEGSSFQSASGPEEQLIFVLKRKEQNKWWLGLLLVAGVVVALALSYIAYKIWTKKDGKVDNDMMEKAEPLEDGYDEVPTATQGKWKASSKKSEATDKMLIFSFGSIVGATENFALHNKLGEGRFGPVYKGKLADGQKVAVKRVAQSSVQGLEFKNGTKFMAKLHHPNLVSLLGVCIERDERILVNDYISSKTLDFYIFDKRKKTVLDWTKRFRIIEGIAQGLLYMHVHSRFKVIHGDLKARNILLDADMNPKISDFGVAGILGFQDSEDNTNRIVERYGYMPPEYTTSGILSIKTDVFSFGVLVLEIVSGKKNNSRHHSHGQLNLIAYGWQLWIEGSPLDLLDTILDVSCAPDEVLRCIHIGLMCVQDKADDRPTMQNVISFLLDEDTKISNPNTPAFLGNRALTSNNYGEESGR* 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00384 784 CDD GH18_hevamine_XipI_class_III 29 296 IPR045321 -
Pte1g00384 784 FunFam Acidic endochitinase SE2 29 299 - -
Pte1g00384 784 Gene3D Transferase(Phosphotransferase) domain 1 558 764 - -
Pte1g00384 784 SUPERFAMILY (Trans)glycosidases 27 292 IPR017853 -
Pte1g00384 784 ProSitePatterns Glycosyl hydrolases family 18 (GH18) active site signature. 147 155 IPR001579 GO:0004553|GO:0005975
Pte1g00384 784 Pfam Glycosyl hydrolases family 18 31 255 IPR001223 GO:0005975
Pte1g00384 784 ProSitePatterns Serine/Threonine protein kinases active-site signature. 602 614 IPR008271 GO:0004672|GO:0006468
Pte1g00384 784 ProSiteProfiles Protein kinase domain profile. 482 752 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g00384 784 Pfam PAN-like domain 309 371 IPR003609 -
Pte1g00384 784 Gene3D Glycosidases 29 299 - -
Pte1g00384 784 SUPERFAMILY Protein kinase-like (PK-like) 465 766 IPR011009 -
Pte1g00384 784 Gene3D Phosphorylase Kinase; domain 1 445 556 - -
Pte1g00384 784 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 557 760 - -
Pte1g00384 784 Pfam Protein tyrosine and serine/threonine kinase 484 751 IPR001245 GO:0004672|GO:0006468
Pte1g00384 784 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 29 298 IPR001223 GO:0005975
Pte1g00384 784 SMART serkin_6 482 752 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g00384 784 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 215 768 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00384 Pte-Chr1 4257204 4260768 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00384 2 295 Glycoside Hydrolase AT5G24090 56.081 4.82e-118 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pte1g00384 PK_Tyr_Ser-Thr 1.1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00384 - - lang:109358482 830.476