Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00369 ATGACGAAAGAAAATATCAGCACTTCTAGTACTGTGGAGATCCCAGTTCGTCTGACACGGGCTCGAGCTGCTGCATTTCGTGCAACAGGCCAGTTGCCCCCTATAAAGGAGCCGGCAAAACCAAATTTGAAGCAGCCTACACGAACCAATGTGAAGAGACCAACGCTGCATAATACATCTCTTCAGCGCAAGAAGAGAGCGACGCTGAAAGATATCACCAATGTTTGCTGTGAACCACTTTACAAAAGCTGTCTCAATGTTACCAAGACTCAGGATAAGATAAGCAAGCAGGTAAAAAATGGCCAGGTTAATGCATCCAAAGCAATTCATTCTGTGGCTGTTCAAATACCAATTTTGCAAACTGATGCAAAACGAAATGGCTCGGGTGATCTTTTGGAAAAAGAGCTCAAATCAGAAGACGCTGCTTTAGAAAATAATGTTATTCTTGGAGGAATTGTTGATAACAAGTCTAGTTCAGATGATAATTGGTTTGGATATCAGAGTTCTGGAATTTGTTCAGAAAGTTCAAGTCCTCAAAGAAAAGCGGAGAAACATGGTTTATCTGGAGCTGTACCCGCATCAAAGAATCCTGATATTATCGATATCGACGCCGGTGAAGAAGACCCTCAACTTTGCAGTATTTATGCGCAGGATATCTACAAGCATTTACGTGTTGCTGAGCTTGCTCGAAGATCGAGTTCTAATTTTATGGAGACAATACAAAGAGATATCACTCAAAGCATGCGTGGGATACTTGTTGATTGGTTGGTCGAGGTTGCTGAGGAATACAAATTGGTACCAGATTCCCTTTACCTTGCCGTACATTTCATAGATAGGTTTCTGTCTCAAAATTACATTGAAAGGCAGCGACTTCAACTGCTCGGCATCACTTGTATGCTAATTGCTTCGAAGTACGAAGAGATTTGTGCCCCTAGAGTAGAAGAGTTTTGTTTCATCACAGACAGCACGTACACAAAAGAAGAGGTTTTGAAGATGGAAAGCCAAGTACTCAAGTACCTTGAATTTCAGCTGTTTGCTCCGACTGCAAAGACTTTCCTGAGGTATGTATATCATCTTTCAAAGTCAAAACGGATTATCACTACTGCCCCTAGCCTTGAGTTGGAGTACCTAGCCAATTACCTAGCTGAGCTCAGTTTGATGGACTATGGGTTCTTGAACTTCCTTCCTTCACTCATTGCTGCATCAGCTGTATTTCTTGCAAGATGGACAATTGATCAGTCAATCCATCCATGGAATTCAACTCTTGAACACTATGCTCATTACAAGGCATCAGACTTGAAAGACACAGTCCTAGCATTACAAGAGTTACAGTTGAACACAAAAGGTTGTCCACTGAGTTCTGTTCGCACGAAGTACAGGCAAGATAAGTTTAAACGTGTGGCAACATGGTCATCACCAAAATTGATTGACACTTTGTTCTAA 1443 0.4165 MTKENISTSSTVEIPVRLTRARAAAFRATGQLPPIKEPAKPNLKQPTRTNVKRPTLHNTSLQRKKRATLKDITNVCCEPLYKSCLNVTKTQDKISKQVKNGQVNASKAIHSVAVQIPILQTDAKRNGSGDLLEKELKSEDAALENNVILGGIVDNKSSSDDNWFGYQSSGICSESSSPQRKAEKHGLSGAVPASKNPDIIDIDAGEEDPQLCSIYAQDIYKHLRVAELARRSSSNFMETIQRDITQSMRGILVDWLVEVAEEYKLVPDSLYLAVHFIDRFLSQNYIERQRLQLLGITCMLIASKYEEICAPRVEEFCFITDSTYTKEEVLKMESQVLKYLEFQLFAPTAKTFLRYVYHLSKSKRIITTAPSLELEYLANYLAELSLMDYGFLNFLPSLIAASAVFLARWTIDQSIHPWNSTLEHYAHYKASDLKDTVLALQELQLNTKGCPLSSVRTKYRQDKFKRVATWSSPKLIDTLF* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00369 480 Pfam Cyclin, C-terminal domain 347 472 IPR004367 -
Pte1g00369 480 CDD CYCLIN_AtCycA_like_rpt1 208 343 - -
Pte1g00369 480 ProSitePatterns Cyclins signature. 249 280 IPR006671 -
Pte1g00369 480 Gene3D - 232 345 - -
Pte1g00369 480 SMART cyclin_7 351 442 IPR013763 -
Pte1g00369 480 SMART cyclin_7 254 338 IPR013763 -
Pte1g00369 480 PANTHER CYCLINS 173 453 IPR039361 -
Pte1g00369 480 FunFam Mitotic cyclin 6 232 332 - -
Pte1g00369 480 Pfam Cyclin, N-terminal domain 218 344 IPR006671 -
Pte1g00369 480 CDD CYCLIN_AtCycA-like_rpt2 347 464 - -
Pte1g00369 480 Gene3D - 218 469 - -
Pte1g00369 480 SMART Cyclin_C_2 347 473 IPR004367 -
Pte1g00369 480 FunFam Cyclin A1 334 469 - -
Pte1g00369 480 SUPERFAMILY Cyclin-like 207 344 IPR036915 -
Pte1g00369 480 PIRSF Cyclin_A_B_D_E 25 479 IPR046965 GO:0016538|GO:0044772
Pte1g00369 480 SUPERFAMILY Cyclin-like 347 475 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00369 Pte-Chr1 4135167 4141006 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00369 1 480 Core Cell Cycle Gene Families AT1G80370 51.753 1.46e-153 443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00369 K06627 - tcc:18595851 550.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g00369 1 4135167 4141006 Pte1g00369 1 4135167 4141006 RCT