Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00361 ATGTCTGCAAGACATCAAATGGTTGCTGAAACTCAATTTGCTAGTATTGAACAAGGGAAAGAAGCAATTGTCGAGGAAGGTGGGATCGGGCCACTTGTGGAAGCGAATGAAGATGGAACTGTGAAAGGGAAGGAGTTTGCTCTGCTGACGTTGCTGCAGTTGTGTGTCAGTAGAGTGAGGAATAGTGGGTTGTTGGTTAGAGAAAGTGGAACTCCTCATTTGGTTGCTTTATCACAGACTGGAAGTGTTCGAGCTAAGCACAAGGTGATGATGAACTTTGGTCTGGACTCATTTCCAAGTATTTGTTTAATTTTGATTTACGGGGTACGAAGACTGAGAAGAATAGAAAAGGTAACGAGGTTCGATAGATTTGTTAATGGGGTGGATAAGGGGAGGTGA 399 0.4336 MSARHQMVAETQFASIEQGKEAIVEEGGIGPLVEANEDGTVKGKEFALLTLLQLCVSRVRNSGLLVRESGTPHLVALSQTGSVRAKHKVMMNFGLDSFPSICLILIYGVRRLRRIEKVTRFDRFVNGVDKGR* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00361 132 SUPERFAMILY ARM repeat 16 89 IPR016024 -
Pte1g00361 132 Gene3D - 2 91 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00361 Pte-Chr1 4054368 4056071 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00361 13 88 U-box Gene Family AT3G54790 46.053 6.09e-14 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00361 - - csav:115707329 120.553