LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte1g00345	ATGAAAGCTGACTGGGACGACCAGTCAGCAAGACCTGCCTTAGGTAGGCAGCAGTACACCTTCATGCCCTCCTCCACTCCTCCAAGTCCTAGTCGCCAGATTATTCCTGATCCCGAATGGTTGGTTGGAATCAAAATGCCACAAGGTGGACCGAATTCTCCTACATTTGGCCTGGTTTCTTCAAACCCATTTGGATTCAGAGGAGAGACTTTAGCTGGTACTGGTTCTCGTGGTGGTTCTCGAATAAGGACTCCTGGACAAAGTGGGACGTGCTCTCCTGCTATACCAGCAGGCTGTGATCAAACATCAGACATTCCAATGTCTGAAGCAATTTCAGACGAGTTTGCCTTTGGAAACAACCCAGCAGGGATTGTGAAGCCATGGGAAAGGGAGAGGATTCATGAAGAGTGCGGATCAGACGATCTGGAACTCACTCTTGGGATCTCCAGAGTTAGGTGCACTCACTAA	468	0.4936	MKADWDDQSARPALGRQQYTFMPSSTPPSPSRQIIPDPEWLVGIKMPQGGPNSPTFGLVSSNPFGFRGETLAGTGSRGGSRIRTPGQSGTCSPAIPAGCDQTSDIPMSEAISDEFAFGNNPAGIVKPWERERIHEECGSDDLELTLGISRVRCTH*	156

Showing 1 to 1 of 1 entries

Annotation information

Show entries

Search:

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte1g00345	155	MobiDBLite	consensus disorder prediction	72	93	-	-
	Pte1g00345	155	MobiDBLite	consensus disorder prediction	1	33	-	-
	Pte1g00345	155	PANTHER	BES1/BZR1 HOMOLOG PROTEIN 3-RELATED	1	152	IPR033264	GO:0003700\|GO:0006351\|GO:0009742
	Pte1g00345	155	MobiDBLite	consensus disorder prediction	13	28	-	-

Showing 1 to 4 of 4 entries

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte1g00345	Pte-Chr1	3946318	3946793	Dispersed

Showing 1 to 1 of 1 entries

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte1g00345	1	152	BZR Transcription Factor Family	AT1G78700	60.784	9.99e-53	168

Showing 1 to 1 of 1 entries

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte1g00345	-		-	cill:122280541	238.039

Showing 1 to 1 of 1 entries