LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte1g00339	ATGGCTTTTTTCACGATCTTCTGTTGTGGAAAGGGTTCGGATCGGAAAGAACGAGGAAAGAAAAAACCAACTTGGAGAGTGTTTTCCTTGAAGGAATTACATTCAGCTACAAACAATTTCAACTACGATAACAAGCTTGGAGAAGGAGGATTTGGCAGTGTTTATTGGGGTCAGCTTTGGGATGGATCGCAGATTGCAGTGAAAAGGTTAAAAGTTTGGAGCAACAAAGCAGACATGGAATTTGCTGTTGAGGTTGAGATTTTGGCAAGAGTAAGGCACAAGAATCTACTTAGTTTACGAGGCTACTGTGCAGAAGGTCAAGAGCGTTTAATTGTATACGACTATATGCCAAATTTGAGCTTGCTTTCGCATCTTCATGGACAACATTCAGCAGAATGTCTTCTGGATTGGAAAAGGAGGATGAATATAGCAATTGGATCTGCTGAGGGAACTGCGTAA	459	0.4118	MAFFTIFCCGKGSDRKERGKKKPTWRVFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKADMEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNLSLLSHLHGQHSAECLLDWKRRMNIAIGSAEGTA*	153

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte1g00339	152	FunFam	PTI1-like tyrosine-protein kinase At3g15890	12	115	-	-
	Pte1g00339	152	Gene3D	Transferase(Phosphotransferase) domain 1	22	152	-	-
	Pte1g00339	152	ProSiteProfiles	Protein kinase domain profile.	40	152	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pte1g00339	152	SUPERFAMILY	Protein kinase-like (PK-like)	21	150	IPR011009	-
	Pte1g00339	152	Pfam	Protein tyrosine and serine/threonine kinase	42	150	IPR001245	GO:0004672\|GO:0006468
	Pte1g00339	152	ProSitePatterns	Protein kinases ATP-binding region signature.	46	68	IPR017441	GO:0005524
	Pte1g00339	152	PANTHER	OS01G0253100 PROTEIN	20	150	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte1g00339	Pte-Chr1	3899186	3901878	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte1g00339	28	152	Trihelix Transcription Factor Family	AT1G70460	52.800	6.02e-38	134

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-XV	Pte1g00339		PK_Tyr_Ser-Thr	3e-15	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte1g00339	-		-	rcu:8282354	298.901