Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00334 ATGACCACTACAGCTACTTCTCTCCCACTCCTTCCTTCTCTCTTTCCATCTTCCAATTTTTCTCTGTCATCATCTTCTTCTTGCTCTTCATTCTTCTGTGGTAGGACACCTATTGGGGTCCACATGAATTCCATTTCTTTGTATGCTTCGACTCCTGTTTTTTCCTCTTCTATATTGAATACTAAAGGTTCTAGAAGACGTTTACGTACTGTGGTTTTTGCTTCTGGCGATTACTATGCTACTCTTGGGGTTTCAAAGTCAGCTAATAGTAAAGAAATCAAAGCTGCTTATCGAAGGTTAGCTCGTCAGTACCATCCCGATGTGAACAAGGAACCTGGAGCGACCGAAAAGTTTAAAGAGATTAGTGCTGCGTACGAGGTGCTATCAGATGATAAAAAGAGGGCTTTGTATGATCAATACGGTGAGGCTGGAGTTAGAAGTGCAGTGGGAGGAGGATCAAGTGCATACACGACAAACCCTTTTGATTTATTTGAGGCCTTTTTTGGCTCAAACATAGGAGGCTTCTCTGGAATGGATCCAACTGGATTTGGTACAACCCGCCGTAGGTCTGTGACAAAGGGTGGAGATATTCGCTATGACATATCAGTGGAATTTTCTGAGGCTATATTTGGAGCAGAGAAAGAATTTGGACTTTCACATCTCGAAAAATGTGAAGCTTGCGCTGGAATTGGAGCAAGGGCTGGCTCAAAGATGAGGGTATGTTCAACATGTGGTGGAAGAGGTCAGGTGATGAGAACTGAGCAGACACCTTTTGGAATGTTTTCACAGGTGTCTGTATGTCCAAATTGTGGTGGGGATGGTGAAGTCATATCTGAATACTGCCGGATATGCAGTGGCGAAGGTCGATTACGTATCAAGAAAAATATAAAAGTCAAAGTTCCTCCTGGAGTCAGCTCCGGCAGCATTCTCAGAGTTGCGGGGGAGGGTGATGCTGGTTTAAGAGGAGGTCCTCCTGGAGATCTTTTTGTATATCTTGATGTGGAAGAGGTAGCTGGTATCCAGAGAGATGGCATAAATTTCTGCTCAACCATATCTATCAGTTACCTTGATGCTATATTAGGGGCCATTGTTAAGGTTAAGACTGTTGAAGGAATGGCTGAACTACAAATCCCTCCTGGTACCCAACCTGGAGATGCACTTGTCCTTGCAAAGAAGGGTGCACCAAAATTAAACAAACCATCAATACGCGGGGACCACATATTTACTGTGAAAGTTACAATACCAAACCGTGTTAGTTCAAAGGAACGTGTGTTGCTAGAAGAACTTGCTTCATTGAGCAACAGTCCAGATAGCCGCTCAAGAATTCGGCCTAAAGCTAATTCTCCTCCTAGGAGAGCTGAAAGTCCAGCGGCAACAGTAGAAGTAAAATCTGAACGAACAGAAGAACAAAATGACTTATGGAAGAAGTTAACGGGTTTTGCTGGACAATCACATTTTGCATCCCTTCATTGCACTGGACTGGAGAACTACACAGGGGTTGGAAAAAGAATCTGGTACAACTACAACCCTTTCAAAGTTCACTTTAGCTTGACAAGCTTGACAAAGTTTCCTTTAGATATATTCGAGGTTGCTAAGGAAGATGGAACAGTTCTAGTTATGAAGTTGCACAAGCTTGACAGAGTTTCCTTTGGAGTTGTGAAGTCCAAGCGTGATAAGTTATAA 1683 0.4302 MTTTATSLPLLPSLFPSSNFSLSSSSSCSSFFCGRTPIGVHMNSISLYASTPVFSSSILNTKGSRRRLRTVVFASGDYYATLGVSKSANSKEIKAAYRRLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRALYDQYGEAGVRSAVGGGSSAYTTNPFDLFEAFFGSNIGGFSGMDPTGFGTTRRRSVTKGGDIRYDISVEFSEAIFGAEKEFGLSHLEKCEACAGIGARAGSKMRVCSTCGGRGQVMRTEQTPFGMFSQVSVCPNCGGDGEVISEYCRICSGEGRLRIKKNIKVKVPPGVSSGSILRVAGEGDAGLRGGPPGDLFVYLDVEEVAGIQRDGINFCSTISISYLDAILGAIVKVKTVEGMAELQIPPGTQPGDALVLAKKGAPKLNKPSIRGDHIFTVKVTIPNRVSSKERVLLEELASLSNSPDSRSRIRPKANSPPRRAESPAATVEVKSERTEEQNDLWKKLTGFAGQSHFASLHCTGLENYTGVGKRIWYNYNPFKVHFSLTSLTKFPLDIFEVAKEDGTVLVMKLHKLDRVSFGVVKSKRDKL* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00334 560 SUPERFAMILY HSP40/DnaJ peptide-binding domain 192 335 IPR008971 GO:0006457|GO:0051082
Pte1g00334 560 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 21 438 - -
Pte1g00334 560 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 211 290 IPR036410 -
Pte1g00334 560 Pfam DnaJ central domain 224 288 IPR001305 GO:0031072|GO:0051082
Pte1g00334 560 SUPERFAMILY Chaperone J-domain 74 183 IPR036869 -
Pte1g00334 560 PRINTS DnaJ domain signature 113 133 IPR001623 -
Pte1g00334 560 PRINTS DnaJ domain signature 79 97 IPR001623 -
Pte1g00334 560 PRINTS DnaJ domain signature 97 112 IPR001623 -
Pte1g00334 560 PRINTS DnaJ domain signature 133 152 IPR001623 -
Pte1g00334 560 CDD DnaJ_zf 224 288 IPR001305 GO:0031072|GO:0051082
Pte1g00334 560 FunFam Chaperone protein dnaJ A6 chloroplastic 224 288 - -
Pte1g00334 560 FunFam Putative Mitochondrial DnaJ chaperone 277 330 - -
Pte1g00334 560 ProSitePatterns Nt-dnaJ domain signature. 118 137 IPR018253 -
Pte1g00334 560 CDD DnaJ_C 196 417 - -
Pte1g00334 560 MobiDBLite consensus disorder prediction 434 465 - -
Pte1g00334 560 Pfam DnaJ domain 77 138 IPR001623 -
Pte1g00334 560 Hamap Chaperone protein DnaJ [dnaJ]. 74 445 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Pte1g00334 560 CDD DnaJ 77 130 IPR001623 -
Pte1g00334 560 ProSiteProfiles dnaJ domain profile. 77 141 IPR001623 -
Pte1g00334 560 SUPERFAMILY HSP40/DnaJ peptide-binding domain 341 425 IPR008971 GO:0006457|GO:0051082
Pte1g00334 560 NCBIfam molecular chaperone DnaJ 77 431 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Pte1g00334 560 ProSiteProfiles Zinc finger CR-type profile. 211 293 IPR001305 GO:0031072|GO:0051082
Pte1g00334 560 FunFam Molecular chaperone Hsp40/DnaJ family protein 340 432 - -
Pte1g00334 560 Gene3D - 340 432 - -
Pte1g00334 560 Gene3D - 224 288 - -
Pte1g00334 560 SMART dnaj_3 76 133 IPR001623 -
Pte1g00334 560 Pfam DnaJ C terminal domain 197 415 IPR002939 -
Pte1g00334 560 Gene3D DnaJ domain 74 178 IPR036869 -
Pte1g00334 560 Gene3D - 194 330 - -
Pte1g00334 560 FunFam Chaperone protein dnaJ A6 chloroplastic 74 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00334 Pte-Chr1 3868660 3881346 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00334 78 184 C2H2 Transcription Factor Family AT1G74250 38.655 8.91e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00334 K03686 - cave:132186071 686.797