Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00330 ATGAGGACAGATGAGCAGAAACTTCTCATTGAAAATGCCAAACTTAAAGCTAAGGTAGAGAGACTCCGAGCAGCTCTATTAAAGTATCCCCAAGCAATTGCATCACCTTCATGCTCTTCTGGAAATGACCAAGAGAATAAAAGCTCCTTGGATTTTTACAATGGAATTTTTGGACTGGAGAATACAAAGATAATAGAGCTAGCTAACCAAGCGGTGGAGGAGCTCGTAAAGATGGCTACTGCTGCGAAACCATTGTGCGTTCGAAGTGTTGAAACTGGCCGTGAAATAATGAACTATGATGAGTACAGGAAAGAGTTCACCATTGCTGATCTCAAAGGTGGCAAGGTTGGCTTAGGACTTTCTTTTGTCATGGACATCCCTTAA 384 0.4193 MRTDEQKLLIENAKLKAKVERLRAALLKYPQAIASPSCSSGNDQENKSSLDFYNGIFGLENTKIIELANQAVEELVKMATAAKPLCVRSVETGREIMNYDEYRKEFTIADLKGGKVGLGLSFVMDIP* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00330 127 Coils Coil 5 25 - -
Pte1g00330 127 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 2 108 IPR042160 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00330 Pte-Chr1 3642134 3643363 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00330 8 109 Homeobox Transcription Factor Family AT1G79840 55.340 4.28e-29 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00330 K09338 - mnt:21408879 160.614