Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00323 ATGAAAAGTAAATATACTTCAATACCCAAAAATCCATATGTAGAACTAGCTCTTCAAAATGATCCTAAAAGTCCTAAAACCTCTTCCAAACCTCTCGTCAAAAAGCTATTTTTCGATGATGGAGTCGATGAGGAATCAAAGTTTGTCAACGGTGGAGACATTGAGGACGCCGATTTCGACAATGCATATCCTCTTACGATTGTTGGCTCTAATAATGGTTCTGGGGTAGCTGGGGCTGTGTTTAATCTAACCACTTCCATCATTGGAGCTGGAATTATGGCTCTTCCTGCAACAATGAAAGTTCTTGGGGTGGTTTTAGGGATCATTATGATAATTTTGATGGGAATTCTATCAGAAATTAGCGTTGAATTATTGGTAAGCTTCTCGGTTTTGTGCAAAGCATCAACCTACGGGGAGGTTGTTCAATGTGCAATGGGAAGAACTGCTAGAGTTTTGTCAGAAGTATGTATTATTGTGAATAATGCAGGTGTTCTGGTCGTTTATTTGATTATAATGGGGGATGTTATGTCGGGTTCTGTTCATCACATGGGAGTTTTTGATCAACTTCTAGGAAATGGATTCTGGGATCATAGGAAGATTGTGATTTTGATCATTATGGTCATCTGTCTTGCACCACTTTGTGCGTTGGAGAAGATCGATTCTTTGAGTTTGACTTCGGCTGCTTCGGTGGTACTTGCTGTTGTCTTTGTCGTTGTTGCCTTCGTTGTTGCACTTATTAAGCTTGCTGAGGGTAAAATTGAGGCTCCAAGGATGACTCCTGATTTTGGTTCGAGAAAAGGCATCTTGGATTTGCTTGTGGTAATTCCCATAATGACCAATGCTTATGTATGTCACTTTAATGTGCAGCCAATATATAATGAGCTCAAAGGGCGGTCTCCTCAGAAAATGAACCGGGTAGGAAGGCTCACAACCATTCTGTGCATTCTTGTCTATGCTTCAACTGCTATATCAGGTTATCTACTCTTTGGTAATGCTACTGAGGCTGATGTGCTGACTAACTTCGATAAGGACCTTGGTATTCGCTTTAGCGCAACCTTGAACTACATTGTCCGTGTAGGCTATATCCTCCACTTGGTTTTGGTATTCCCTGTTATACATTTTTCTTTAAGGCAAACTGTAGACACTCTGCTGTTTGAGGGATCACCCCCACTTTCAGAAAGTAGGAAGAGATCTTTGATTTTGACCGTGATACTGCTAGTGCTGATTTATATTGGTTCTACTATAATACCAAATATTTGGACGGCATTTAAATTTACTGGAGCAACTACAGCGGTGTCATTGGGGTTTATATTTCCATCTCTTATTGCCTTGAGGTTAAATCATCGAGGGAAGCATTTGAGTTTTCTTGAGGGGTTCTTCTCATGGTCGACGTTGATACTGGCAGTAGTTGTCAGCATCGTTGGCGTTATTGGGAATATTTATAGCCTTGAAAGGAAATCAGAGTAA 1467 0.4049 MKSKYTSIPKNPYVELALQNDPKSPKTSSKPLVKKLFFDDGVDEESKFVNGGDIEDADFDNAYPLTIVGSNNGSGVAGAVFNLTTSIIGAGIMALPATMKVLGVVLGIIMIILMGILSEISVELLVSFSVLCKASTYGEVVQCAMGRTARVLSEVCIIVNNAGVLVVYLIIMGDVMSGSVHHMGVFDQLLGNGFWDHRKIVILIIMVICLAPLCALEKIDSLSLTSAASVVLAVVFVVVAFVVALIKLAEGKIEAPRMTPDFGSRKGILDLLVVIPIMTNAYVCHFNVQPIYNELKGRSPQKMNRVGRLTTILCILVYASTAISGYLLFGNATEADVLTNFDKDLGIRFSATLNYIVRVGYILHLVLVFPVIHFSLRQTVDTLLFEGSPPLSESRKRSLILTVILLVLIYIGSTIIPNIWTAFKFTGATTAVSLGFIFPSLIALRLNHRGKHLSFLEGFFSWSTLILAVVVSIVGVIGNIYSLERKSE* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00323 488 PANTHER AMINO ACID TRANSPORTER 72 473 - -
Pte1g00323 488 Pfam Transmembrane amino acid transporter protein 74 479 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00323 Pte-Chr1 3516999 3519532 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00323 1 489 Amino Acid or Auxin Permease AAAP Family AT1G80510 73.523 0.0 676
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00323 - - qsa:O6P43_027913 677.167