Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00315 ATGTGGAATCCTCTATCATGGGTCATGGAGATAGCTGCTATTATGGCCATTGCTTTGGCTAATGGAGGGGGAAAGCCACCAGATTGGCAAGATTTTGTTGGCATATTGACATTGCTACTTATCAATTCCACCATAAGTTTTATCGAGGAGAATAATGCAGGCAATGCTGCAGCAGCACTTATGGCTGGCCTGGCTCCAAAAACCAAAGTTCTAAGAGATGGAAGATGGTCTGAGCAAGAAGCTGCAATTTTGGTGCCAGGAGATATCATCAGCGTCAAGTTAGGAGATATCATTCCAGCTGATGCTCGTCTCTTGGATGGTGACCCTCTTAAAATCGATCAGTCGTCCCTGACTGGCGAATCATTACCTGTTACAAAGATGCCAGGAGATGAAGTCTTTTCTGGTTCCACAGTTAAACAAGGTGAGATTGAGGCTATTGTCATTGCCACCGGCGTCCACACTTTCTTTGGTAAGGCCGCTCACCTCGTCGACAGCACCAACCAAGTAGGACATTTCCAAAAGGTGTTGACTGCCATTGGTAATTTCTGCATTTGCTCGATTGCTGTGGGCATGATTGTAGAGGTTGTGGTGATGTATCCAATCCAGCACCGCCAGTATAGGAGTGGAATTGACAATCTCTTGGTTCTTCTCATAGGAGGGATTCCAATTGCCATGCCAACAGTTTTGTCAGTGACCATGGCTATTGGTTCCCATAGATTGTCGCAACAAGGTGCTATCACGAAAAGGATGACAGCCATTGAGGAGATGGCTGGAATGGATGTTTTATGTAGTGACAAGACTGGCACTCTGACTTTGAACAAGCTTACTGTAGACAAGAACCTGATTGAGGTTTTCGCAAATGATCTGGAAAAAGACATGGTTATTTTGCTTGGAGCAAGGGCTTCTAGAGTTGAGAACCAAGATGCTATTGATGCTTGCATTGTTGGAATGCTAGGTGACCCTAGGGAGGCAAGAGAAGGTATCACTGAGGTACATTTTCTGCCCTTTAATCCTGTGGACAAGCGTACAGCAATAACATATATTGACCAGAACGGAGCCTGGCATAGAGTTAGCAAAGGTGCACCGGAGCAGATAATAGAACTCTGCAATCTTCGTCCAGATGTGAAAAAGAAAGCTCATGCTATAATTGATAAATTTGCTGACCGTGGCCTACGATCTCTAGCTGTATCTAGACAAATGGTACCAGAAAAATCTAAAGAGGGTGCAGGAACACCATGGGAATTTGTGGGGCTCTTGCCTCTCTTCGATCCTCCCAGGCATGACAGCGCAGAAACCATCAATCGAGCCCTTCATCTTGGGGTGAATGTCAAGATGATCACGGGTGATCAGCTTGCAATTGGGAAGGAGACAGGTCGAAGGCTTGGGATGGGAACAAACATGTATCCTTCATCCTCTCTGCTTGGGGATCACAAAGATGAAACCATGGGCGTTCTTCCTGTTGATGAGCTCATTGAGAAAGCTGATGGCTTTGCTGGAGTTTTTCCTGAGCACAAGTATGAGATTGTTAAGAGACTGCAAGAAAGGAAGCATATATGTGGGATGACCGGAGATGGTGTGAATGATGCTCCTGCTCTGAAAAGAGCAGATATAGGAATTGCAGTTGCTGATGCAACTGATGCAGCAAGGAGTGCATCTGACATTGTTCTAACAGAACCAGGACTAAGTGTGATAGTGAGTGCAGTCTTGACAAGTAGATCCATTTTCCAAAGAATGAAGAATTACACCATCTATGCTGTTTCGATCACAATCCGTATAGTCCTGGGGTTTCTCCTCCTAGCACTCATATGGAAATTTGACTTTTCTCCGTTTATGGTTCTGATCATTGCCATACTCAATGATGGGACCATTATGACCATTTCCAAGGACAGAGTGAAGCCATCACCTACTCCAGATTCATGGAAACTAAAGGAGATATTTGCCACAGGCGTTGTACTTGGTGCCTACTTGGCTGTCATGACTGTTGTTTTCTTTTGGGCTGCTTATACATCTGACTTCTTCTCAGAGAGGTTCGGGGTTAGACCGATTAAAGATAACCCTGAAGAGCTTACTTCGGCTGTGTATCTTCAAGTGAGTATTGTAAGTCAGGCTCTCATCTTCGTCACAAGGTCAAGAAGCTGGTCTTTTATAGAACGTCCCGGTTTCTTGCTTGTTACTGCTTTTTTAATAGCACAACTGATTGCCACCATAATTGCTGTATATGCTAGCTGGAGTTTTGCAAAGATACAAGGGATTGGATGGGGTTGGGCTGGTGTCATTTGGCTCTACAGCATTGTTTTCTATTTCCCACTGGATATTCTTAAATTTATGATCCGTTATGCATTAACTGGCAAGGCCTGGAATAATCTCTTCGAGAAAAAGACTGCTTTCACGACAAAGAAAGATTATGGGAAAGGAGAAAGAGAGGCACAATGGGCTCAAGCTCAACGCACTCTACATGGACTTGATCCTCCTCAATCTGACATCATGAAAGACAAGAACTATACAGAACTGTCTGAAATTGCTGAGCAAGCCAAGAGGCGTGCTGAGGTTGCCAGGTTGAGAGAGCTTCATACACTCAAGGGGCATGTTGAATCGGTAGTGAAACTGAAGGGACTAGACATTGACACCATTCAACAGCACTACACCGTTTGA 2652 0.4457 MWNPLSWVMEIAAIMAIALANGGGKPPDWQDFVGILTLLLINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGRWSEQEAAILVPGDIISVKLGDIIPADARLLDGDPLKIDQSSLTGESLPVTKMPGDEVFSGSTVKQGEIEAIVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGMIVEVVVMYPIQHRQYRSGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFANDLEKDMVILLGARASRVENQDAIDACIVGMLGDPREAREGITEVHFLPFNPVDKRTAITYIDQNGAWHRVSKGAPEQIIELCNLRPDVKKKAHAIIDKFADRGLRSLAVSRQMVPEKSKEGAGTPWEFVGLLPLFDPPRHDSAETINRALHLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGDHKDETMGVLPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRSIFQRMKNYTIYAVSITIRIVLGFLLLALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGAYLAVMTVVFFWAAYTSDFFSERFGVRPIKDNPEELTSAVYLQVSIVSQALIFVTRSRSWSFIERPGFLLVTAFLIAQLIATIIAVYASWSFAKIQGIGWGWAGVIWLYSIVFYFPLDILKFMIRYALTGKAWNNLFEKKTAFTTKKDYGKGEREAQWAQAQRTLHGLDPPQSDIMKDKNYTELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV* 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00315 883 SUPERFAMILY HAD-like 259 569 IPR036412 -
Pte1g00315 883 ProSitePatterns E1-E2 ATPases phosphorylation site. 265 271 IPR018303 -
Pte1g00315 883 Pfam haloacid dehalogenase-like hydrolase 259 536 - -
Pte1g00315 883 Gene3D - 275 422 IPR023299 GO:0000166
Pte1g00315 883 Gene3D - 832 883 - -
Pte1g00315 883 SFLD Haloacid Dehalogenase 245 573 - -
Pte1g00315 883 Gene3D - 66 150 - -
Pte1g00315 883 PANTHER CALCIUM-TRANSPORTING ATPASE 1 817 - -
Pte1g00315 883 NCBIfam plasma-membrane proton-efflux P-type ATPase 1 740 IPR006534 GO:0008553|GO:0016020|GO:0120029
Pte1g00315 883 SUPERFAMILY Calcium ATPase, transduction domain A 66 163 IPR008250 -
Pte1g00315 883 PRINTS H+-transporting ATPase (proton pump) signature 379 397 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte1g00315 883 PRINTS H+-transporting ATPase (proton pump) signature 494 510 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte1g00315 883 PRINTS H+-transporting ATPase (proton pump) signature 553 578 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte1g00315 883 PRINTS H+-transporting ATPase (proton pump) signature 522 538 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte1g00315 883 PRINTS H+-transporting ATPase (proton pump) signature 694 715 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte1g00315 883 FunFam Plasma membrane ATPase 66 150 - -
Pte1g00315 883 SUPERFAMILY Calcium ATPase, transmembrane domain M 1 780 IPR023298 -
Pte1g00315 883 SFLD p-type atpase 245 573 IPR044492 -
Pte1g00315 883 FunFam ATPase 4 plasma membrane-type 507 749 - -
Pte1g00315 883 CDD P-type_ATPase_H 1 775 IPR006534 GO:0008553|GO:0016020|GO:0120029
Pte1g00315 883 FunFam Plasma membrane ATPase 415 570 - -
Pte1g00315 883 Pfam E1-E2 ATPase 65 242 - -
Pte1g00315 883 PRINTS P-type cation-transporting ATPase superfamily signature 263 277 - -
Pte1g00315 883 PRINTS P-type cation-transporting ATPase superfamily signature 417 428 - -
Pte1g00315 883 PRINTS P-type cation-transporting ATPase superfamily signature 545 557 - -
Pte1g00315 883 PRINTS P-type cation-transporting ATPase superfamily signature 522 541 - -
Pte1g00315 883 PRINTS P-type cation-transporting ATPase superfamily signature 113 127 - -
Pte1g00315 883 PRINTS P-type cation-transporting ATPase superfamily signature 439 449 - -
Pte1g00315 883 Gene3D - 28 749 - -
Pte1g00315 883 NCBIfam HAD-IC family P-type ATPase 35 282 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte1g00315 883 NCBIfam HAD-IC family P-type ATPase 497 608 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte1g00315 883 Coils Coil 834 854 - -
Pte1g00315 883 Gene3D - 260 559 IPR023214 -
Pte1g00315 883 FunFam Plasma membrane ATPase 275 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00315 Pte-Chr1 3475976 3480599 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00315 1 884 Primary Pumps ATPases AT3G42640 83.937 0.0 1526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00315 K01535 - rcu:8280305 1540.01