Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00307 ATGCCAACTGACATTTTATCAGGTCTCGGACAAACCGTATGTGTCACTGGCGCAGGTGGCTTCATAGCCTCTTGGATTGTCAAACTGCTCTTGGAGAAAGGCTACACTGTTAGAGGAACTGTCAGGAATCCAGATGATCCCAAAAATGCACACTTAAGGGAGCTGGATGGAGCTAAAGAGAGGCTGTCTCTCTGGAAAGCCGATCTACTTGATTCTGAGTCTCTCAAAGTTGCTATCGATGGTTGCGATGGCGTTTTCCATACTGCATCTCCAGTGACCGACAACCCCGAGGAAATGGTGGAGCCAGCTGTGGTTGGTACCAAGAATGTGATTACTGCTGCTGCAGAAGCCAAAGTTAGACGTTTGGTGTTCACTTCATCAATTGGTGCCGTCTATATGGACCCTGACAGGAGTCCAGATGCTGTGGTTGATGAGTCTTGTTGGAGTAATCTCGAGTATTGCAAGAGCACTAAGAATTGGTATTGCTATGGAAAGGCAGTGGCCGAGCAAGCAGCATGGGATATTGCAAAGGAGAAGGGAGTAGATTTGGTTGTGTTGAACCCAGTCTTGGTTCTTGGACCATTGCTGCAACCTACAGTCAATGCTAGCATTATCCATGTGCTCAAGTATCTGACTGGCTCTGCTAAGACATATGCCAATGCCACTCAAGCTTATGTGCATGTCAAAGATGTGGCTTTAGCTCACATACTTCTCTTTGAGACTCCTTCTGCATCAGGTCGATACCTTTGTGCTGAGAGTGTGCTGCACCGTGGGGAGGTGGTCGAGATTTTGGCCAAGCATTTTCCAGAATATCCACTTCCCACCAAATGCTCAGATGATAAAAATCCAAGAGCAAAGCCCTACAAATTCTCAAACCAAAAGCTCAAGGATTTAGGTTTGGAGTTCACCCCAGTTTGGCAAGGTCTATATGAAACTGTGAAGAGCCTTCAGGAGAAAGGGATCCTTCCACTTCCAAAACAGCAACAAGACCCTCTTCAAATTAAGTCATGA 1011 0.4639 MPTDILSGLGQTVCVTGAGGFIASWIVKLLLEKGYTVRGTVRNPDDPKNAHLRELDGAKERLSLWKADLLDSESLKVAIDGCDGVFHTASPVTDNPEEMVEPAVVGTKNVITAAAEAKVRRLVFTSSIGAVYMDPDRSPDAVVDESCWSNLEYCKSTKNWYCYGKAVAEQAAWDIAKEKGVDLVVLNPVLVLGPLLQPTVNASIIHVLKYLTGSAKTYANATQAYVHVKDVALAHILLFETPSASGRYLCAESVLHRGEVVEILAKHFPEYPLPTKCSDDKNPRAKPYKFSNQKLKDLGLEFTPVWQGLYETVKSLQEKGILPLPKQQQDPLQIKS* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00307 336 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 12 313 - -
Pte1g00307 336 CDD FR_SDR_e 13 300 - -
Pte1g00307 336 Pfam NAD dependent epimerase/dehydratase family 13 244 IPR001509 -
Pte1g00307 336 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 10 317 IPR036291 -
Pte1g00307 336 Gene3D - 4 335 - -
Pte1g00307 336 FunFam Cinnamoyl-CoA reductase 1 4 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00307 Pte-Chr1 3409790 3413438 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00307 10 276 Monolignol Biosynthesis Gene Families AT1G80820 76.030 6.48e-144 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00307 K09753 - qsa:O6P43_027941 567