Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00306 ATGGCTCCAAACGAAAGCTCTGCTTCCAGGCCTCAATTTATTGCTAGTACCGGAAACCGAAGCATGTCCAGTGCACCTTTGATTGATAATATAGATGCTGGGCAAATTATTGTATCTGATAAGAGAAGCTGGAAAAACTTATTTGCATACATGGGTCCTGGCTTTCTTGTTTCTATTGCATATATAGATCCTGGGAACTTTGAAACTGATCTTCAGTCAGGAGCACAATATAAATATGAGTTGCTGTGGATAATATTGGTGGCATCCGCTGCAGCTCTTATCATCCAGTCCCTGGCTGCTAATCTTGGGGTTGTAACAGGAAAGCATTTGTCAGAGCACTGTAGAACAGAATATCCTCGGGTCACAAACTTTATCCTTTGGGTTTTAGCTGAAATTTCCATAGTTGCTTGTGATATTCCTGAAGTGATAGGAACTGCTTTTGCATTAAATATGCTTTTCAGCATACCTGTTTGGGTTGCTGTTTTGCTTACTGGCCTTAGCACATTAATTCTTTTGGCATTACAACAATACGGGGTTCGAAAACTTGAGTTCTTGATAGCTTTTCTCGTGTTTACCATTGCTGCATGCTTCTTTGTGGAGCTTGGTTATGCAAAACCTGATGCTAAAGAGGTTTTGAAGGGTCTTTTTGTACCACAACTTAAAGGAGACGGTGCTACTGGCCTTGCAATTTCACTACTAGGAGCCATGGTTATGCCGCACAATCTCTTTCTCCATTCAGCATTGGTGCTTTCACGGAAAATACCACGATCAGTTCGTGGCATCAAAGACGCCTGCAGATTTTATATGATAGAAAGTGCATTTGCTCTCGCAGTGTCATTTCTCATAAATATAGCTGTTATCTCTGTAAGTGGTGCAGTTTGCAATTCTTCTAATTTGAATCTAGAAGATCAAGAGAGCTGTCAAGACTTGGACTTGAACAAAGCTTCTTTTCTACTAAGAAATGTCTTGGGTAATTGGAGTTCAAAACTTTTTGCAATTGCTTTACTTGCATCAGGTCAAAGTTCTACTATAACTGGGACATATGCTGGGCAGTATGTTATGCAGGGATTTCTTGATTTACGACTGAAACCATGGATCCGCAACTTGTTAACTCGTTGCTTGGCTATAGTCCCTAGCTTGATTGTTGCAATTTTAGGTGGCTCTGCTGGTGCTGGAAAGCTAATAATTATTGCATCAATGATTTTGTCGTTTGAGCTTCCTTTTGCTTTGATTCCCCTCCTGAAGTTCACTAGCAGCAAAACCAAGATGGGAATGCATGCAAACTCTACAACGGTAAAAGTTTGTTTTAAATGCTACGAGTAA 1323 0.4036 MAPNESSASRPQFIASTGNRSMSSAPLIDNIDAGQIIVSDKRSWKNLFAYMGPGFLVSIAYIDPGNFETDLQSGAQYKYELLWIILVASAAALIIQSLAANLGVVTGKHLSEHCRTEYPRVTNFILWVLAEISIVACDIPEVIGTAFALNMLFSIPVWVAVLLTGLSTLILLALQQYGVRKLEFLIAFLVFTIAACFFVELGYAKPDAKEVLKGLFVPQLKGDGATGLAISLLGAMVMPHNLFLHSALVLSRKIPRSVRGIKDACRFYMIESAFALAVSFLINIAVISVSGAVCNSSNLNLEDQESCQDLDLNKASFLLRNVLGNWSSKLFAIALLASGQSSTITGTYAGQYVMQGFLDLRLKPWIRNLLTRCLAIVPSLIVAILGGSAGAGKLIIIASMILSFELPFALIPLLKFTSSKTKMGMHANSTTVKVCFKCYE* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00306 440 Hamap Divalent metal cation transporter MntH [mntH]. 38 436 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte1g00306 440 Pfam Natural resistance-associated macrophage protein 67 429 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte1g00306 440 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 23 434 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte1g00306 440 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 46 423 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte1g00306 440 PRINTS Natural resistance-associated macrophage protein signature 229 252 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte1g00306 440 PRINTS Natural resistance-associated macrophage protein signature 179 200 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte1g00306 440 PRINTS Natural resistance-associated macrophage protein signature 339 358 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte1g00306 440 PRINTS Natural resistance-associated macrophage protein signature 154 173 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte1g00306 440 PRINTS Natural resistance-associated macrophage protein signature 126 152 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte1g00306 440 PRINTS Natural resistance-associated macrophage protein signature 367 384 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte1g00306 440 PRINTS Natural resistance-associated macrophage protein signature 399 418 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte1g00306 440 NCBIfam Nramp family divalent metal transporter 52 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00306 Pte-Chr1 3401325 3408588 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00306 15 432 Inorganic Solute Cotransporters AT1G15960 84.211 0.0 733
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00306 K21398 - qsa:O6P43_027942 726.857