Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00305 ATGGCTGAACTAGCCCTGCCAGAAAATCACTCTAACGCTCCCTCTAGAAACATAATCTTCGAGAAGTATGAGACGGGGAGGGTGTTAGGGAAAGGGACCTTTGCCAAAGTCTACCATGCCAGACATTTGATCACCAATGAAAGCGTGGCCATCAAAGTGATAAACAAAGAAAAAGTGAAAAAAGAAGGGCTAATGGATCAAATCAAGCGTGAAGTCTCGATCATGCGTTTGGTGAGGCATCCAAACATAGTTGAGCTCAAGGAAGTGATGGCCACAAAAGGGAAAGTCTTCTTTGTGATGGAATATGTAAAAGGTGGGGAACTGTTTGCTAAAGTGGTAAAAGGAAAACTGAAAGAAGACGTTGCTAGAAAGTACTTTCAACAACTGGTTAATGCTGTGGCATTCTGTCATAGCCGTGGAGTCTATCACCGAGACTTGAAGCCTGAAAATTTGCTCTTGGATGAAAATGGTGATCTGAAAGTTTCTGACTTTGGTTTATCAGCTTTGCCAGAACAACTTCAAATTGATGGATTGCTTCACACCCCATGTGGGACACCTTCTTATGTTGCACCTGAAGTGTTGAGGAAGAAAGGCTATGATGGGTCTAAAGCAGACATATGGTCCTGTGGTGTAATTCTGTACATGTTACTATCAGGACGTCTACCATTTCAAGAAGAGAATGTTATGAACATGTATAGGAAGATTTTCAAGGCTGAATATGAATGCCCGTCATGGATTTCTACTGAAGCTAAAGACTTGATCTGGAAGGTACTTGTTGTTAATCCTGAGAGAAGGTATTCAATCCAAGCGATTACGCAACATGCTTGGTTTCAAGCTGGATCCCCCAAATCTCTACTCCAAGAGCCAGCTTCTATGAATATTACTTATGAGAAGGATGATAAGAACAGCGAGGGAACAGAATTGGCAAGGACAAAGGCCCCACCTCCATTTTACAATGCATTCAATCTCATCTCATCTTTTTCTTCTGGGTTTCACCTCTCCAGTTTGTTCGAGAGCAAGAGGAAGTCCAGCTCTATTTTCACATCCAAGTGTTCTGCCTCAACAGTCTTGACAAAGCTTGAAATGCTAGCCAAGAAATTGAACTATAAACTGACAAGTAAGAAGGACTTCGATTTGAAAATGCAAGGGAATAGAGAAGGGAGGAAAGGAAAGTTGGAAGTGTGTGCAAAGGTGTTTGAGGTGGCACCTGAGGTGGCTGTGGTTGAGTTCTCAAAATCATCAGGCGACACTTTTGAGTACAGCAAGTTCTGTGAGGAAGAGGTGAGGATCGCACTCAAAGACATTGTTTGGAGCTGGCAGGGTGAGCACACTGTTGACAGTAACAGTTAA 1350 0.4267 MAELALPENHSNAPSRNIIFEKYETGRVLGKGTFAKVYHARHLITNESVAIKVINKEKVKKEGLMDQIKREVSIMRLVRHPNIVELKEVMATKGKVFFVMEYVKGGELFAKVVKGKLKEDVARKYFQQLVNAVAFCHSRGVYHRDLKPENLLLDENGDLKVSDFGLSALPEQLQIDGLLHTPCGTPSYVAPEVLRKKGYDGSKADIWSCGVILYMLLSGRLPFQEENVMNMYRKIFKAEYECPSWISTEAKDLIWKVLVVNPERRYSIQAITQHAWFQAGSPKSLLQEPASMNITYEKDDKNSEGTELARTKAPPPFYNAFNLISSFSSGFHLSSLFESKRKSSSIFTSKCSASTVLTKLEMLAKKLNYKLTSKKDFDLKMQGNREGRKGKLEVCAKVFEVAPEVAVVEFSKSSGDTFEYSKFCEEEVRIALKDIVWSWQGEHTVDSNS* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00305 449 Pfam NAF domain 315 371 IPR004041 GO:0007165
Pte1g00305 449 SMART serkin_6 23 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g00305 449 ProSiteProfiles NAF domain profile. 313 338 IPR018451 GO:0007165
Pte1g00305 449 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 17 427 - -
Pte1g00305 449 ProSiteProfiles Protein kinase domain profile. 23 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g00305 449 FunFam Non-specific serine/threonine protein kinase 14 102 - -
Pte1g00305 449 SUPERFAMILY Protein kinase-like (PK-like) 19 319 IPR011009 -
Pte1g00305 449 Gene3D Kinase associated domain 1, KA1 322 438 - -
Pte1g00305 449 FunFam Non-specific serine/threonine protein kinase 16 313 - -
Pte1g00305 449 Pfam Protein kinase domain 23 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g00305 449 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Pte1g00305 449 CDD CIPK_C 319 433 - -
Pte1g00305 449 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524
Pte1g00305 449 Gene3D Transferase(Phosphotransferase) domain 1 15 321 - -
Pte1g00305 449 FunFam Non-specific serine/threonine protein kinase 313 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00305 Pte-Chr1 3395088 3396437 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00305 18 443 CBL-interacting serine-threonine protein kinases AT5G25110 65.268 0.0 574
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pte1g00305 Pkinase 1.5e-77 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00305 - - qsu:112024946 604.749