Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00302 ATGGATTACTCTTCTTGGGTAAACACTTCGTTGGATCTTAACATGCATCCTCTCAGACCTCTTGATGAAGCTCCTGTATCTAAAAAAGAGATGGAAAGCAACTTCTTGGAGCTGGGAAGGAAGACTTATTTTAACAAACAAGAGGCTGGTACCTTAATGGAGGAATTGAACCGAGTGAGTGCAGAAAACAAGAAATTGACTGAAATGCTGACTGAGATGTGTGAAAACTATAATACTCTTCAAAATCATTTGGAGGATTACATGAGAAAGAACCCAGAAAAAGAGATGAGTTCATCAAAGAAAAGAAAGTCAGAAAGCAGCAATACAAATAACAATAGCAACAACGTACCTGGAACCAATGGAAACTCAGAGAGCAGCTCAACTGACGAAGAATCCTACAAGAAACCAAAGGAAGAAAGCACAAAGGCCAAAACTTCAAGAGTATATGTCAGGACTGAAGCATCTGATACAAGCCTTATTGTGAAGGATGGGTATCAGTGGCGAAAGTATGGGCAGAAGGTGACTAGGGACAATCCTTCCCCAAGGGCATACTTCAAATGCTCCTTTGCTCCAAGTTGTCCAGTCAAAAAGAAGGTCCAAAGAAGCGTGGAGGACCAATGTGTTTTGGTTGCAACCTATGAAGGAGAGCACAATCATCCCAACACTTGTCAGCTGGAAGCAATATCAGGTTCCAGACAAGGTCTGACACTTGGTTCAATGCCCGGGACAGCCTCTATTAGCTCGGATGGACCTACGATCACCCTTGACTTGACAAAACAAAAGTCCCTTAATGATGCCAAGAATTCAAAAGACAAGATTCAGTCACCAGAAATGCAGCAGTTCTTGGCGGAACATATGGCTTCTTCCTTGATCAAGGATCCTAATTTCACGGAAGCACTAGCTGCAGCAATATCTGGAAAAATCTTGCACAAGGATCCGATGAATAAGTGGCGGTGA 957 0.4253 MDYSSWVNTSLDLNMHPLRPLDEAPVSKKEMESNFLELGRKTYFNKQEAGTLMEELNRVSAENKKLTEMLTEMCENYNTLQNHLEDYMRKNPEKEMSSSKKRKSESSNTNNNSNNVPGTNGNSESSSTDEESYKKPKEESTKAKTSRVYVRTEASDTSLIVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDQCVLVATYEGEHNHPNTCQLEAISGSRQGLTLGSMPGTASISSDGPTITLDLTKQKSLNDAKNSKDKIQSPEMQQFLAEHMASSLIKDPNFTEALAAAISGKILHKDPMNKWR* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00302 318 Coils Coil 49 90 - -
Pte1g00302 318 Gene3D WRKY domain 143 221 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte1g00302 318 FunFam WRKY transcription factor 40 146 223 - -
Pte1g00302 318 SMART WRKY_cls 161 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte1g00302 318 MobiDBLite consensus disorder prediction 91 153 - -
Pte1g00302 318 Pfam WRKY DNA -binding domain 162 220 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte1g00302 318 ProSiteProfiles WRKY domain profile. 156 222 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte1g00302 318 MobiDBLite consensus disorder prediction 103 127 - -
Pte1g00302 318 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 43 308 IPR044810 GO:0003700
Pte1g00302 318 MobiDBLite consensus disorder prediction 128 146 - -
Pte1g00302 318 SUPERFAMILY WRKY DNA-binding domain 158 220 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00302 Pte-Chr1 3370574 3374727 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00302 4 312 WRKY Transcription Factor Family AT1G80840 49.844 5.15e-91 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte1g00302 WRKY 1.6e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00302 - - qsa:O6P43_017941 420.239