Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte1g00296 | ATGGAAGACTTGGTGACCATAATGTGCCCAAATTCTCCATATGTATGGGATGGAAGGGGATTCTCCGAGTGTTTTGGAGACTTATTGTTTGTTTTTACGGCGAACTTAGCAACTGTTACAATGATCGCTATATTTGCAATGACTACGAAGCATCATAGAAAAACTCAAAGGATTAGCTTGTCAGAAAGAATTGTCTTGGATTTTGTACCAACCATTGGGGCATCTCTATCAGTTTTGGAGATAATTCTGTCAATGAAGACAGAACTTGATGGACACCATGTTATATTTTATAAGTGGCTTACTAGCTGTTCAGAGTGTGTAATGTGGACAAGCATCATCATCTTCTCAAGGTGTGCAGGCGATCATAGCACAATCTGCATGGGGACTTTAGGTTATTGGTGGATAGTAAAATCCCTTCTGGAGATCATCCATTTGCTAACGGTGTCTTCATCATTGAAGGTGTACATGTGTGCCAAGGAAATATTCTCTGTCATATTGAATATCATCTTTTGCATCAGTATAATTGTTATCAGGATAAAGAAATCATCTTCCAAAAGTGGTTTGTTGGAAGAACCTCTTCTTTCTGAAGAGGAAGACCTTGAGGAAGGTTGTCATGGAAGACCTAAAGGAGTTACTTGGAGCTTTTGGGATCATATGATGTTTAACTTCATGACTCATGTAATGAAACTTGGGATTGCAAAGCAGCTGGGTAGTGAAGATCTGCTGCAGTTACCAAATGACATGGATGTTTGTTCCTGTCTTGATATAATGTCACGCTGCTGGGATTCTCAAATGAGAGAAAATAATGCAGGTCCTTCTTTGTTTAAATCAATATGTTGTGCATATGGATGGCCTTATCTCTGTCTTGGTTTTTTAAAGGTGATAAACGATTGCCTGGGTTTTGCTGGACCACTGCTTCTCAATAAGTTGATTCGGTTCCTTCAGCAAGGTTCTGGAGATTGGCATGGTTATGTTCTTGCAGTGTTATTAGGTCTCATTTCTATCATTAAATCCTTTTTGGATACGCAGTATACTTTTCATCTTTCAAAGCTGAAGCTGAAGCTCCGATCAAGTATCACTACTCTTATCTATCAGAAGTGCCTGTGGGTGAGCTTGGCAGAGCGATCAAAATTTTCTGATGGAGAAATACAAACATTCATGTCCGTGGATGCAGAGAGAACCATTAACTTGTGTAACTGTTTCCATGACATGTGGAGCTTGCCTCTACAAATCAGCTTGGCTCTGTACCTTCTGTATACACAAGTGAAATTTGCTTTTGTTTCTGGAGTAGCAATAACAATTTTGCTCATACCAGTAAATAGATGGATAGCCAAACTAATTGCAGGAGCTACTGAGAAAATGATGAAGGAGAAGGATGAGAGGATAAGGAAGACAGGAGAACTTTTGTCTTATATCCGAACCATAAAGATGTATGCGTGGGAAGTTATCTTTTCTAATTGGTTGATGGAGACTAGATCCTCGGAAGTGAAGCACTTGGCAATGCGAAAGTACTTGGATGCATGGTGCGTGTTCTTTTGGGCAACTACTCCAACTCTATTTTCTCTTTTCACCTTTGGCCTCTTTGCATTGTCAGGACACCAACTTGATGCTGCTACGGTGTTCACTTGTCTTGCATTGTTTAACACGTTGATTTCTCCTCTGAACTCATTCCCATGGGTCATAAATGGACTGATTGATGCTATGATATCCATTAGAAGGTTGAGTAGATTCCTCTCTTGCCCTGTCGCCAGAGAGATTGCTAATTCTCATTTAACCCTGTCCTCAACTGACCAGCCTCATTGGAGAAAAGATGTGGCTGTTAGTTTTGATGACGCATGCTGTTCTTGGGCAAACAGTGAGGAAAAAGAACTAAATTTGGCGTTGAATCATGTTAATCTTGGCCTTTCAAGGGGTTCATTCATTGCAGTTATTGGAGAGGTCGGCTCTGGTAAGTCGTCGTTATTGTATTCAATTCTTGGAGAAATGCGTAATGTCCGTGGATCAATAATTAAAGATGGAACGATAGCATATGCACCACAGGTGCCATGGATCTTGTCTGGAACAATACGCGAAAATGTATTGTTCGGAAAGAGCTATGATCCAAACAGGTATTTAGATACTATAGGGGCCTGTGCACTTGATGTCGACATCTCAATGATGACTGGAGGTGACATGACTTATATTGGAGAGAAAGGTGTCAACTTATCTGGTGGACAGAGGGCACGTCTTGCTTTAGCAAGGGCCGTGTATTGTTCCTCTGATATCGTTTTGCTTGATGATATCCTTAGTGCAGTTGATGCACAAGTTGCTCGTTGGATATTACAAAATGCCATTCTTGGGCCCCTCATGCAGGGAAAAACAAGAATACTTTGTACACATAACATACAGGCAATATCTTCTGCTGACATGATTGTGGTAATGGACAAAGGATGTGTGAAGTGGCAAGGAAGTTCAGCTGACTTCCAGATGTCTTCATACGTAGCTCATTCCCCTCTGAATGAAATCGACACATCCATATGCAATCAAGAAGAAGCTTGCAGTTCTGAAGTAAAACTTGTCTCTATAGAGGGTGATGATTCACATTCCTCAAAGGAAGCTGAACGCATTACTGAAGTTGAAAAAAGGAAGGAGGGTAAAGTGGAATATAGAGTTTACAAGGAATATGCTATGTTCTCTGGTTGGGTTATCACAGTTGTAATTTTCCTATCGGCCATTTTGATGCAAGCCTCCAAGAATGGAAATGACCTGTGGCTTTCATATTGGGTTGATACATCAACAGGGAGCAGTCATAACTCCACTTCATTCTATCTGGTTGTGCTAAGTTTCTTTTGTATCCTAAATTCTTCTCTAACACTGGTGAGAGCATTCTCATTTGCATTTGGTGGCTTGCAAGCGGCAAAGAAGGTGCATAATAGACTTCTCAGTATGCTTACGAATGCACCTGTGCGATTCTTTGATCAGACACCAGTTGGAAGAATATTGAACAGGTTGTCTTCCGATCTGTATACAATTGATGATTCACTTCCTTTCATTCTTAACATTCTCCTAGCAAATTTTGTTGGGCTGTTGGGTATTGCAATTGTTTTATCATACACGCAGGTATTCTTCTTGCTTTTGCTACTGCCAGTTTGGTACATCTACACCAAAATCCAGCTCTTCTATAGGTCAACATCAAGGGAACTAAGAAGACTTGACAGTGTTTCTCGGTCTCCAATATACTCTTCTTTCACAGAAACACTGGATGGATCATCAACTGTAAGAGCTTTTATGTCTGAGGATCACTTCTTTGCCAGGTTCGTTGAACACTTAAAGTTATATCAGCAAACTTCTTATACAGAAGTAAATGCAAGTCTGTGGCTTTCACTGCGTCTTCAGCTATTAGCTGCATTTATCGTCTCATTCATTGCTCTGATGGCTGTCATTGGATCTCGAGAAAAGCTACCAGTAAGATTCGGCACCCCAGGGCTGGTCGGACTTGCACTCTCGTATGCAGCTCCAATTGTGTCTTTACTGGGAAGCTTTCTAACAAGTTTCACTGAAACGGAAAAAGAAATGGTAGCCATTGAAAGAGCTCTAGAGTATATGGACATTCCTCAAGAAGAACTACTAGGACCTCAATCACTAAGCTCAGATTGGCCAAACAATGGAATTGTTCAGTTTCAGAATGTTACATTGAAATACTTGCCATCTTTGCCGGCTGCACTTCGTGATATTACTTGCACAATTGAAGGAGGGATGCAGGTTGGAATAATTGGAAGAACAGGAGCTGGAAAGTCTAGTGTGTTGAATGCCCTTTTCCGTCTAACTCCAATTTGTGCAGGCTCCATATTGGTGGATGGCATAAATATTGCAAATATTCCTGTTCGAGATATCCGTGCACGTTTTGCAATTGTTCCTCAGAGCCCATTTTTGTTTGAGGGAACAATAAGGCAAAATCTAGATCCATTGCAATCAAGCAATGATTTGAAGATTTGGAAAACGTTGGAGCAATGCCATGTGAAGGAGGAAGTAGAAGCAGGGGGAGGCCTGGATGCTAAGATAAAGGAATCTGGCTTATCATTTTCTGTTGGACACAGACAGCTTCTTTGCCTCGCTCGTGCACTTCTGAAATCTTCAAGAGTTCTTTGTTTGGATGAATGCACAGCTAATATAGACACTAAAACAGCTGCAATGCTGCAAAAGACCATATCCAGTGAATGCAGAGGAATGACAGTTATAACTATTGCACACCGCATTTCCACGGTCCTGAATATGGACAGGATTTTGATACTTGATCATGGCAACCTGGTGGAGCAAGGAAACCCACAAGCCCTCCTGCAAGATGACCACTCCGTGTTTTCCAGATTTGTTAAGGCTTCCACGATGTAG | 4368 | 0.4109 | MEDLVTIMCPNSPYVWDGRGFSECFGDLLFVFTANLATVTMIAIFAMTTKHHRKTQRISLSERIVLDFVPTIGASLSVLEIILSMKTELDGHHVIFYKWLTSCSECVMWTSIIIFSRCAGDHSTICMGTLGYWWIVKSLLEIIHLLTVSSSLKVYMCAKEIFSVILNIIFCISIIVIRIKKSSSKSGLLEEPLLSEEEDLEEGCHGRPKGVTWSFWDHMMFNFMTHVMKLGIAKQLGSEDLLQLPNDMDVCSCLDIMSRCWDSQMRENNAGPSLFKSICCAYGWPYLCLGFLKVINDCLGFAGPLLLNKLIRFLQQGSGDWHGYVLAVLLGLISIIKSFLDTQYTFHLSKLKLKLRSSITTLIYQKCLWVSLAERSKFSDGEIQTFMSVDAERTINLCNCFHDMWSLPLQISLALYLLYTQVKFAFVSGVAITILLIPVNRWIAKLIAGATEKMMKEKDERIRKTGELLSYIRTIKMYAWEVIFSNWLMETRSSEVKHLAMRKYLDAWCVFFWATTPTLFSLFTFGLFALSGHQLDAATVFTCLALFNTLISPLNSFPWVINGLIDAMISIRRLSRFLSCPVAREIANSHLTLSSTDQPHWRKDVAVSFDDACCSWANSEEKELNLALNHVNLGLSRGSFIAVIGEVGSGKSSLLYSILGEMRNVRGSIIKDGTIAYAPQVPWILSGTIRENVLFGKSYDPNRYLDTIGACALDVDISMMTGGDMTYIGEKGVNLSGGQRARLALARAVYCSSDIVLLDDILSAVDAQVARWILQNAILGPLMQGKTRILCTHNIQAISSADMIVVMDKGCVKWQGSSADFQMSSYVAHSPLNEIDTSICNQEEACSSEVKLVSIEGDDSHSSKEAERITEVEKRKEGKVEYRVYKEYAMFSGWVITVVIFLSAILMQASKNGNDLWLSYWVDTSTGSSHNSTSFYLVVLSFFCILNSSLTLVRAFSFAFGGLQAAKKVHNRLLSMLTNAPVRFFDQTPVGRILNRLSSDLYTIDDSLPFILNILLANFVGLLGIAIVLSYTQVFFLLLLLPVWYIYTKIQLFYRSTSRELRRLDSVSRSPIYSSFTETLDGSSTVRAFMSEDHFFARFVEHLKLYQQTSYTEVNASLWLSLRLQLLAAFIVSFIALMAVIGSREKLPVRFGTPGLVGLALSYAAPIVSLLGSFLTSFTETEKEMVAIERALEYMDIPQEELLGPQSLSSDWPNNGIVQFQNVTLKYLPSLPAALRDITCTIEGGMQVGIIGRTGAGKSSVLNALFRLTPICAGSILVDGINIANIPVRDIRARFAIVPQSPFLFEGTIRQNLDPLQSSNDLKIWKTLEQCHVKEEVEAGGGLDAKIKESGLSFSVGHRQLLCLARALLKSSRVLCLDECTANIDTKTAAMLQKTISSECRGMTVITIAHRISTVLNMDRILILDHGNLVEQGNPQALLQDDHSVFSRFVKASTM* | 1456 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte1g00296 | 1455 | Pfam | ABC transporter | 628 | 760 | IPR003439 | GO:0005524 | |
Pte1g00296 | 1455 | SMART | AAA_5 | 637 | 811 | IPR003593 | GO:0016887 | |
Pte1g00296 | 1455 | SMART | AAA_5 | 1244 | 1428 | IPR003593 | GO:0016887 | |
Pte1g00296 | 1455 | FunFam | ABC transporter C family member 13 | 586 | 844 | - | - | |
Pte1g00296 | 1455 | ProSitePatterns | ABC transporters family signature. | 735 | 749 | IPR017871 | GO:0005524|GO:0016887 | |
Pte1g00296 | 1455 | SUPERFAMILY | ABC transporter transmembrane region | 894 | 1205 | IPR036640 | GO:0005524|GO:0016020 | |
Pte1g00296 | 1455 | Gene3D | - | 1205 | 1453 | IPR027417 | - | |
Pte1g00296 | 1455 | CDD | ABC_6TM_MRP7_D1_like | 289 | 574 | - | - | |
Pte1g00296 | 1455 | FunFam | ATP-binding cassette (ABC) transporter, putative | 1204 | 1452 | - | - | |
Pte1g00296 | 1455 | CDD | ABCC_MRP_domain2 | 1216 | 1435 | - | - | |
Pte1g00296 | 1455 | CDD | ABCC_MRP_domain1 | 607 | 810 | - | - | |
Pte1g00296 | 1455 | FunFam | ATP-binding cassette subfamily C member 10 | 265 | 582 | - | - | |
Pte1g00296 | 1455 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 291 | 566 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Pte1g00296 | 1455 | SUPERFAMILY | ABC transporter transmembrane region | 279 | 585 | IPR036640 | GO:0005524|GO:0016020 | |
Pte1g00296 | 1455 | FunFam | ABC transporter C family member 5 | 861 | 1201 | - | - | |
Pte1g00296 | 1455 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 1218 | 1451 | IPR003439 | GO:0005524 | |
Pte1g00296 | 1455 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1211 | 1443 | IPR027417 | - | |
Pte1g00296 | 1455 | Gene3D | - | 583 | 845 | IPR027417 | - | |
Pte1g00296 | 1455 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 607 | 834 | IPR003439 | GO:0005524 | |
Pte1g00296 | 1455 | PANTHER | ATP-BINDING CASSETTE SUB-FAMILY C | 213 | 1452 | - | - | |
Pte1g00296 | 1455 | CDD | ABC_6TM_MRP7_D2_like | 897 | 1195 | - | - | |
Pte1g00296 | 1455 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 599 | 821 | IPR027417 | - | |
Pte1g00296 | 1455 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 898 | 1183 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Pte1g00296 | 1455 | Pfam | ABC transporter | 1235 | 1382 | IPR003439 | GO:0005524 | |
Pte1g00296 | 1455 | Gene3D | ABC transporter type 1, transmembrane domain | 265 | 582 | IPR036640 | GO:0005524|GO:0016020 | |
Pte1g00296 | 1455 | Gene3D | ABC transporter type 1, transmembrane domain | 860 | 1201 | IPR036640 | GO:0005524|GO:0016020 | |
Pte1g00296 | 1455 | Pfam | ABC transporter transmembrane region | 899 | 1141 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Pte1g00296 | 1455 | Pfam | ABC transporter transmembrane region | 288 | 554 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte1g00296 | Pte-Chr1 | 3339436 | 3352618 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte1g00296 | 638 | 817 | Calmodulin-binding Proteins | AT2G36910 | 34.694 | 4.20e-21 | 99.0 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte1g00296 | K05674 | - | qsa:O6P43_027949 | 1989.54 |