Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00291 ATGGATACAGAGTTGCAGAATGAGTTCATTTTCCGTTCAAGATTGCCAGATATCTTCATCCCAAATCACCTACCTCTCCATTCCTTCGTCTTTGAAAACTTGTCGGAGTTTGGATTGCGTCCTTGCTTGATCAATGGAACCACAGGGGATGTCTTCACCTACTACGACGTGGAGCTAACTTCAAGGAAAGTCGCCTCTGGATTCAACAAGCTTGGCATCCAACAAGGTGACGTGGTCATGCTCCTCCTTCCAAATTCACCCGAATTCGTCTTCACGTTTCTCGGTGCTTCCTTCCGAGGCGCCATGACCACAGCTGCCAACCCTTTCTTCACGCCTGCTGAGATCGCCAAGCAAGCAAAAGCTTCCAACGCGAAGCTCGTCGTCACGCAAGCTGCATGCTATGAAAAGGTCAAGGATTTAGGGATCAAGCTCATCTTCACGGATTCCCCACCTGATGGGCATTCGCATTTTTCAGAGTTGACTCAAGCGGATGAAGATGAGTTGCCTGAGGTGGATATCCGGCCTGATGATGTCGTGGCACTACCCTATTCATCCGGGACGACTGGGTTACCTAAAGGGGTGATGTTGACCCACAAAGGACTGGTGACCAGTGTGTCACAACAAGTGGATGGAGACAACCCAAACCTGTATTACACTACAGAGGATGTAGTTCTGTGCGTGCTTCCTCTGTTTCATATATACTCTCTCAACTCTGTCTTCCTGTGTAGTTTAAGAGCCAAAGCAGCGATCTTGCTGATGCCCAAGTTTGAAATCCATGCATTGTTGGGTTTGATAGAGAAATACAAAGTGACGATCGCCCCAGTGGTACCACCCATCGTATTAGCCATAGCCAAATCTCCTGATCTTGATAACTATGACTTGTCTTCCATAAAGGTGTTGAAGTCAGGTGGGGCACCACTTGCGAAGGAGCTTGAAGAAGCGGTAAGGGCCAAATTTTCCAACGCTAAACTTGGCCAGGGCTATGGGATGACAGAGGCAGGTCCTGTTCTGACCATGAGCATGGCTTTTACCAAGGAACCAGTGGCTGTGAAAGCAGGTGCATGTGGAACAGTTGTGAGAAATGCAGAGTTGAAGATAGTCGACCCAGAAACTCGTGAGTCCCTCCCAAGAAACCAGCCCGGTGAGATTTGCATCAGGGGTGACCAGATCATGAAAGGTTATCTTAACGATCCTGAGGCGACGGAGAGGACCATAGACAAAGAGGGTTGGTTGCATACAGGCGACATTGGGTATGTGGACGACGACGACGAGCTGTTCATCGTGGATAGACTGAAAGAACTGATCAAATACAAAGGTTTCCAGGTGGCCCCTGCTGAGCTTGAGGCCCTTCTACTCACTCATCCTCATGTCTCCGATGCTGCCGTGGTCGCAATGAAGGACGAAGCAGCAGGAGAGGTTCCTGTCGCATTTGTGGTGAGATCAAACAGCAACACCATTGTTACCGAGGATGAGATCAAGGAGTTTGTTTCAAAACAGGTGGTGTTTTACAAGAGAATAGGTCGAGTATTTTTCATTGATGCTATTCCAAGGTCACCATCTGGGAAAATCTTGAGAAAGAATTTGAAAGCCAAACTAGCTAGCAGCTGA 1608 0.4826 MDTELQNEFIFRSRLPDIFIPNHLPLHSFVFENLSEFGLRPCLINGTTGDVFTYYDVELTSRKVASGFNKLGIQQGDVVMLLLPNSPEFVFTFLGASFRGAMTTAANPFFTPAEIAKQAKASNAKLVVTQAACYEKVKDLGIKLIFTDSPPDGHSHFSELTQADEDELPEVDIRPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVSQQVDGDNPNLYYTTEDVVLCVLPLFHIYSLNSVFLCSLRAKAAILLMPKFEIHALLGLIEKYKVTIAPVVPPIVLAIAKSPDLDNYDLSSIKVLKSGGAPLAKELEEAVRAKFSNAKLGQGYGMTEAGPVLTMSMAFTKEPVAVKAGACGTVVRNAELKIVDPETRESLPRNQPGEICIRGDQIMKGYLNDPEATERTIDKEGWLHTGDIGYVDDDDELFIVDRLKELIKYKGFQVAPAELEALLLTHPHVSDAAVVAMKDEAAGEVPVAFVVRSNSNTIVTEDEIKEFVSKQVVFYKRIGRVFFIDAIPRSPSGKILRKNLKAKLASS* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00291 535 FunFam Long-chain-fatty-acid--CoA ligase FadD 12 432 - -
Pte1g00291 535 Gene3D - 4 431 IPR042099 -
Pte1g00291 535 CDD 4CL 20 528 - -
Pte1g00291 535 Pfam AMP-binding enzyme 38 437 IPR000873 -
Pte1g00291 535 SUPERFAMILY Acetyl-CoA synthetase-like 12 534 - -
Pte1g00291 535 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 7 530 - -
Pte1g00291 535 FunFam 4-coumarate--CoA ligase 2 433 535 - -
Pte1g00291 535 Gene3D - 432 534 IPR045851 -
Pte1g00291 535 ProSitePatterns Putative AMP-binding domain signature. 181 192 IPR020845 -
Pte1g00291 535 Pfam AMP-binding enzyme C-terminal domain 446 522 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00291 Pte-Chr1 3287937 3290567 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00291 6 500 Monolignol Biosynthesis Gene Families AT1G51680 69.625 0.0 709
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00291 K01904 - qsa:O6P43_027979 882.863