Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00290 ATGAAACCCAGTCAACAACCGCGCGGAATCCTATTCGGTAACGGCAATGGACCCACCACCCAAGGCTCCAACCGTGACCAAACCAATCGGCGCCGTCCTGACCTCACCTTGCCTATTCCACAGCGGGAAGCACAATTAGCTGTACCTTTACCTTTACCTCCAAACTCAGCTCCCTCCACCAGTCACAACCACCTCTCCAACTCGGCTGGACCCATCACAATACTCAGACATCAACCCATCCTTTTCTCCGAGCTGGAACGACTCAATAGGATCGGCAGCGGAGCGGGTGGCACAGTCTATAAAGTCCGACACCGACCCACCGGTCGGTTCTTCGCTCTCAAAGTTATAAGTGGTTACCATGAAGAGACGGTCAGACATCAGATCCACAGAGAGATCCAGATCCTTAGAGATGTCGATCATCCAAACGTCGTCAAGTGTCATGAAATGTTCGACCATAATGGTGACATCCATATGCTTTTGGAGTTGCTGGAAGGTGGGTCTTTGGAAAGTACCCACATCCCAGATGAACCCCGTCTTGCTGAGATAGCTCGTCAGATTCTCTGCGGCCTAGCTTATCTCCAAAAGAGGCATATTGTTCACAGGGATATAAAGCCTTCCAATTTGTTGATCAACGCGAGGAAGCAGGTCAAGATAGCAGATTTTGGAGTCTCCAAGATTCTGGCACAGACCATGGATCAATGTAACTCATCAGTCGGTACGATTGCATACATGAGTCCAGAGAGAATCAATACAGATCTTAGCAATGGTCGATACGATGGATATGCTGGGGATATATGGAGTTTTGGGGTTAGCATATTGGAATTTTATGTGGGTCGATATCCATTTGGGGTTGGAAGGCTAGGTGATTGGGCAAGTTTGATGTGTGCCATTTGTATGTCCGAACCACCCCAGGCACCTGTTACAGCTTCAAGGGAGTTTAGGGACTTCATAGGTCGTTGTTTGCAGAGAGAGGCTTGTAGAAGATGGACGGCTATGCAGCTGTTAAGGCATCCTTTCATAACACAGCTTACCGGTCCAAAACATCCGGTTCACCAGAATCTTGGTCAGCGTCAGCTATTACCACCCCCTCCACCCCTCTCTTCCTAA 1107 0.4896 MKPSQQPRGILFGNGNGPTTQGSNRDQTNRRRPDLTLPIPQREAQLAVPLPLPPNSAPSTSHNHLSNSAGPITILRHQPILFSELERLNRIGSGAGGTVYKVRHRPTGRFFALKVISGYHEETVRHQIHREIQILRDVDHPNVVKCHEMFDHNGDIHMLLELLEGGSLESTHIPDEPRLAEIARQILCGLAYLQKRHIVHRDIKPSNLLINARKQVKIADFGVSKILAQTMDQCNSSVGTIAYMSPERINTDLSNGRYDGYAGDIWSFGVSILEFYVGRYPFGVGRLGDWASLMCAICMSEPPQAPVTASREFRDFIGRCLQREACRRWTAMQLLRHPFITQLTGPKHPVHQNLGQRQLLPPPPPLSS* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00290 368 ProSiteProfiles Protein kinase domain profile. 85 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g00290 368 SUPERFAMILY Protein kinase-like (PK-like) 82 352 IPR011009 -
Pte1g00290 368 ProSitePatterns Protein kinases ATP-binding region signature. 91 114 IPR017441 GO:0005524
Pte1g00290 368 CDD PKc_MAPKK_plant_like 83 342 - -
Pte1g00290 368 ProSitePatterns Serine/Threonine protein kinases active-site signature. 198 210 IPR008271 GO:0004672|GO:0006468
Pte1g00290 368 Gene3D Transferase(Phosphotransferase) domain 1 165 353 - -
Pte1g00290 368 SMART serkin_6 85 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g00290 368 MobiDBLite consensus disorder prediction 1 26 - -
Pte1g00290 368 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 49 344 - -
Pte1g00290 368 MobiDBLite consensus disorder prediction 1 69 - -
Pte1g00290 368 Pfam Protein kinase domain 86 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g00290 368 FunFam Mitogen-activated protein kinase 2 165 351 - -
Pte1g00290 368 FunFam Dual specificity mitogen-activated protein kinase kinase 72 163 - -
Pte1g00290 368 Gene3D Phosphorylase Kinase; domain 1 72 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00290 Pte-Chr1 3283175 3287837 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00290 1 356 MAP Kinase Kinase Gene Family AT1G51660 63.989 6.08e-155 439
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Pte1g00290 Pkinase 1.8e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00290 K13413 - jre:108983062 483.411