Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00289 ATGTATGAAGGGACCTCCATCCCTTCTCGGGGTTCCAACTCTTCCTCCTCCTCCATCGGCTTACTACCGGCAAACCTTGCAAGGAACAACCAGCATGAGGACGTGGAATTAGCCGGCTGCCATGCCAACAACGAACAGGCCTCTCTGGATGGGGAGGATCATCTGGATGACGAGGACATGTTCGAGAATCCCGACGATCCTTTCGACATGACCACCACCAAGAATGCCTCACTCGACAGGCTCAAGAAATGGAGGGTTAAAGGTCTATCAGATTTGCTAAAAACAAATGCTGACAAGGGAATTGTTGGAGACGAAACTGATTTAGCAAAAAGGAGGAATGCATTTGGGTCAAATACTTATCCTCGAAAAAAGCCCCGAAGTTTATGGAGGTTCCTTTGGGATGCCTGGCAAGATATGACTCTTATAATATTGATTGTGGCTGCCATACTCTCATTAGGACTTGGAATAAAAACAGAGGTCATGAGAGGAGGTAGAACACTGAAGATTTCAATTTTTGACATTGTTGTTGGTGATGTCATTCCTCTTAAAATAGGTGATCAGATTCACAAGGATCACAAAGCACCGTTTATGATGTCTGGTTGCAAAGTGGCTGATGGAGTTGGTACCATGCTGGTCACTGGTGTGGGTATTAATACTGAATGGGGATTGTTGATGGCTAGTATATCCGAGGACACGGGTGAAGAGACGCCTTTACAGGTGCGCTTGAATGGAGTTGCCACTTTTGTCGGTATGGTTGGGCTTATAGTAGCTGTTTCTGTACTTGCAGTCCTTCTAGGAAGATACTTCACTGGAAACACCAAAGACGATGATGGTAACGTGCAATTCATACCTGGCAAGACTGGTGTGAGTAAATCATTTGATGGGGTAGTTAAAATCTTCACTATTGCTGTAACCATCGTGGTGGTTGCGGTACCCGAAGGTCTCCCACTGGCTGTTACTCTGACGCTGGCATACTCCATGAGGAAAATGATGGCAGATAAAGCCTTGGTGCGAAGACTGTCATCCTGCGAAACAATGGGATCTGCAACCACCATCTGCAGCGATAAGACAGGAACGTTGACCTTGAATCAGATGACCGTAGTTGAGGCGCATGTTGAGAGGAAGAAAATGAGTACACCAGATGACTCCTCCCAGCTACACCCTGCAGTTTTAACTTTAATGAAGGAAGCCATCGCTCAAAATACTAGTGGAAATGTTTTTGTACCCAAGAGTGGTGGAGAGATTGAGATCACTGGCTCACCCACGGAAAAGGCAATCCTTTCTTGGGCAGTCAAGTTGGGTATGGATTTTGAACGTGTCAAATCAGAATCAGCAGTGCTCCATGTTTTCCCTTTTAACTCGGAGAAGAAACGAGGTGGAGTCGCTGTAAAACTGATGGACTCTCAAGTTCATATACATTGGAAAGGAGCCGCAGAAATGGTTCTGGGGTCATGCACGCAATATCTCGACTCTAATGGTTGCTTGCAATCACTTGAAAAAGAGAAGGAATATTTCAGTGCAGCTATTGATAACATGGCTGCCAGCAGTTTAAGATGTGTGGCCATTGCATACAGACCGTACGAATTAGAAAAGGTTCCGTCTGAACAGGAGGATTTGGATAAGTGGCCTTTACCTGAAAATGACCTCGTTTTGCTTGGTATCGTAGGTATAAAGGATCCTTGTCGTCCTGGTGTCAGAGAAGCAGTCGAGTCATGCAGAAAAGCTGGTGTTAAGGTACGGATGGTTACTGGAGATAATATTCAAACAGCAAAGGCAATTGCACTGGAGTGTGGGATTCTGAGTTCCAGTGAAGATGCTGTTGAGCCAACTATAATTGAAGGGAAGACATTCCGTTCTTATTCAGAAAAAGAAAGAGAACAAGCTGCCAAGAAAATTACGGTGATGGGCAGGTCATCCCCAAATGACAAACTTTTGCTTGTTCAAGCACTACGTCAACAAGGGGATGTTGTTGCTGTCACCGGAGATGGCACAAATGATGCTCCTGCACTTCATGAGGCAGATATTGGTCTTTCTATGGGGATTCAGGGAACTGAAGTTGCAAAAGAAAGCTCAGATATAATCATCCTTGATGACAACTTTGCTTCAGTTGTTAAGGTTGTCCGCTGGGGCCGTTCGGTATATGCCAATATCCAAAAATTCATCCAGTTCCAGCTCACTGTTAACGTTGCAGCTTTGGTAATCAATGTGGTGGCTGCAATATCTTCTGGTGGTGTTCCTTTGAATTCTGTACAGCTTTTATGGGTGAACCTTATCATGGATACGCTTGGCGCACTTGCATTGGCTACTGAACCTCCAACAGACTCTCTTATGCGCAGAAAACCAGTAGGCAGAAGGGAACCTCTAATAACAAATATCATGTGGAGGAACTTGTTCGTACAGGCCGGGTATCAAGTTTGCGTTCTCCTTGTTCTTAACTTCCGTGGTGACGATATTCTTCAACAGATGAACGAAAGTACCCCCAGTACAACGAAAATAAAAAACACTTTGATATTTAATGCATTTGTGTTCTGCCAGATATTCAATGAGTTCAATTCTCGCAAGCCAGATCAATTTAATGTCTTCAAGGGAGTTACTAAGAATTACCTCTTCATGGGAATCATTGCAGCCACCATGGTGCTTCAGGTAATAATCATTGAATTCCTTGGTAAGTTCACCCAGACAGTGAAGCTCGATTACAAGCTATGGCTGGTATCCATTGCAATTGGAATTTTCAGTTGGCCACTCGCCTTGGTTGGAAAATTGATTCCTGTTCCTAAAACTCCTCTGTCCAAATTCTTCACTAGGCCAGTGCAACGACTGAAAAGACGCCGTAGGACATGA 2841 0.4449 MYEGTSIPSRGSNSSSSSIGLLPANLARNNQHEDVELAGCHANNEQASLDGEDHLDDEDMFENPDDPFDMTTTKNASLDRLKKWRVKGLSDLLKTNADKGIVGDETDLAKRRNAFGSNTYPRKKPRSLWRFLWDAWQDMTLIILIVAAILSLGLGIKTEVMRGGRTLKISIFDIVVGDVIPLKIGDQIHKDHKAPFMMSGCKVADGVGTMLVTGVGINTEWGLLMASISEDTGEETPLQVRLNGVATFVGMVGLIVAVSVLAVLLGRYFTGNTKDDDGNVQFIPGKTGVSKSFDGVVKIFTIAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSSCETMGSATTICSDKTGTLTLNQMTVVEAHVERKKMSTPDDSSQLHPAVLTLMKEAIAQNTSGNVFVPKSGGEIEITGSPTEKAILSWAVKLGMDFERVKSESAVLHVFPFNSEKKRGGVAVKLMDSQVHIHWKGAAEMVLGSCTQYLDSNGCLQSLEKEKEYFSAAIDNMAASSLRCVAIAYRPYELEKVPSEQEDLDKWPLPENDLVLLGIVGIKDPCRPGVREAVESCRKAGVKVRMVTGDNIQTAKAIALECGILSSSEDAVEPTIIEGKTFRSYSEKEREQAAKKITVMGRSSPNDKLLLVQALRQQGDVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAISSGGVPLNSVQLLWVNLIMDTLGALALATEPPTDSLMRRKPVGRREPLITNIMWRNLFVQAGYQVCVLLVLNFRGDDILQQMNESTPSTTKIKNTLIFNAFVFCQIFNEFNSRKPDQFNVFKGVTKNYLFMGIIAATMVLQVIIIEFLGKFTQTVKLDYKLWLVSIAIGIFSWPLALVGKLIPVPKTPLSKFFTRPVQRLKRRRRT* 947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00289 946 FunFam Calcium-transporting ATPase 677 926 - -
Pte1g00289 946 Pfam Cation transporter/ATPase, N-terminus 86 151 IPR004014 -
Pte1g00289 946 SMART Cation_ATPase_N_a_2 80 156 IPR004014 -
Pte1g00289 946 Gene3D - 677 926 - -
Pte1g00289 946 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 360 557 IPR023299 GO:0000166
Pte1g00289 946 ProSitePatterns E1-E2 ATPases phosphorylation site. 355 361 IPR018303 -
Pte1g00289 946 Pfam haloacid dehalogenase-like hydrolase 350 674 - -
Pte1g00289 946 Gene3D - 131 367 - -
Pte1g00289 946 SFLD p-type atpase 335 712 IPR044492 -
Pte1g00289 946 NCBIfam HAD-IC family P-type ATPase 291 386 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte1g00289 946 NCBIfam HAD-IC family P-type ATPase 627 740 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte1g00289 946 Gene3D - 560 676 IPR023214 -
Pte1g00289 946 Pfam Cation transporting ATPase, C-terminus 745 922 IPR006068 -
Pte1g00289 946 FunFam Calcium-transporting ATPase 553 705 - -
Pte1g00289 946 Gene3D - 368 559 IPR023299 GO:0000166
Pte1g00289 946 Pfam E1-E2 ATPase 197 331 - -
Pte1g00289 946 SUPERFAMILY Calcium ATPase, transmembrane domain M 83 924 IPR023298 -
Pte1g00289 946 FunFam Calcium-transporting ATPase 363 560 - -
Pte1g00289 946 PANTHER CATION TRANSPORTING ATPASE 72 159 - -
Pte1g00289 946 SUPERFAMILY HAD-like 351 765 IPR036412 -
Pte1g00289 946 NCBIfam calcium-translocating P-type ATPase, PMCA-type 195 924 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Pte1g00289 946 PRINTS P-type cation-transporting ATPase superfamily signature 553 564 - -
Pte1g00289 946 PRINTS P-type cation-transporting ATPase superfamily signature 684 696 - -
Pte1g00289 946 PRINTS P-type cation-transporting ATPase superfamily signature 660 679 - -
Pte1g00289 946 PRINTS P-type cation-transporting ATPase superfamily signature 575 585 - -
Pte1g00289 946 PRINTS P-type cation-transporting ATPase superfamily signature 353 367 - -
Pte1g00289 946 FunFam Calcium-transporting ATPase 9 plasma membrane-type 207 377 - -
Pte1g00289 946 SFLD C1.7: P-type atpase like 335 712 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00289 Pte-Chr1 3246541 3257087 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00289 70 947 Primary Pumps ATPases AT3G21180 68.592 0.0 1286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00289 K01537 - qsa:O6P43_017878 1333.55