Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00259 ATGTTCCTGTCTTTTTGCTTCATCTCCTTGCTCTTGTCATCTGCAACCTCAACTTCTGCTGCTATTGCTACCACTACTCAAGCTAGTAGGAGGATTTTACACCAACCCTTTTTCCCATTGGGCTCACTACCACCATCTCAGCCTCCATCTCCTTCTCCACCTTCATCACCACCACTATCGCCAACCCCACCCAATCCCAAGTATCCATTTTCTTCTACTACACCTGACCAGTCTCCATTTTTTCCGACATACCCTTCACCCCCACCCCCACCTTCACCATCTAACTTTGCTTCGTTCCCAGCTAATATCTCCTCTCTTATCCTTCCTCAAAGTCCAAAGCCCAAATCTTCTTCTTCTAAACTCTTCGCCATTGCCATTGCTGCGGTTGTTTCAGCTGCTGTGGTTGTCGTCATTTCCCTTTTCTTCTACTGTCGCCGGAAAAGACGGTATGACTTTTCCGACAGTAAGACTCACAGATCGGAAAATAGTAACAGATTGTTCTCTAACCGCGTGGAAAACAACCCCACTCCCAACAACAGCAACCATAATGGTCCCCCTAAAGTGCGAGCTAGTTCTTCTGCAAGCTCTGAGTTTTTGTATCTGGGTACCATTGCTAACTCTCGAGGTATAGACGATCGACCGGAAGCTCGTAACAATGGTGCTGGCTCGGGAAACAGTAGTGGTAATGATGGTTTGGGTTTGGATCCTCGTAAAATGGACTCTCCTGAGTTGCACCCACTTCCACCGCTTGCTAGACAAAATTCGATGTTTCATAGTGGAAATGTTGATGTGACTTCAACTGGTAACGATGAAGAAGAGTTCTACTCACCAAGAGGGTCGCTGGATGGAAGAGAGACTTTCAGTGGTACTGGATCGGGTTCTAGAAGAGTGTTTTTCACCATTGCAGGTGAAAATTTTGGTAGAAGGAATCGTGATTCAAGCTCTAATTCATGTTCATCTTCAACTTCAGATTCACCAGCTAGGTCTCATTCAATTAGCTTATCTCCACCTGTGAGCTTGAGTCCCAGAAGGTTGCAGCCTAAGTCACCAGAATCTACTGCTGTTTGTGCTCCACAGTCATCTCCACCATCGGCGCCACAGTTGATTGAGAAGCAACGATCTAGTTCACCATCTCCATTGTCGTTTCCTGAGAGAAAATCTGACGGATCACCTAGAATTTCTCACGGTCCACAGCAGATTGTGCATTCTCCTTCACTGTCTTCACTTTCTTCAACTCCCGGTAGAGGGTTTGGTGTAAATGGGGTTTCTTCTTCTCCATCTCCACCTTCTACTTCACCAGATAGGTTTTTGCAGAAGTGCACGGATGAGGTATCCTCAACCTCGGCAAGGGAGAGAGTGTCTAATGCTTCCGAACATACCAAGTTGTCGTCTTTGTCATCTTCAGCATCTTCATCACCAGAGAGATTTGTGGAGAAGAATTTGTATGCATCATCGCCAAGACTTTCAAATGCTTCAGAAAGATACGGGAAATCTGTTTTAGCATCTCCAGTTTTCTCACCTTCCTTGCTTTCATCACCAGAGAGGGGATGGGAAAAGAACTTGCTTCAGTCACCAGGAGTACCTAATGTTTCAGATCAGAAAAGAGTTTTCTTGCATTCGCCTTCATCAGCAGAGGGAGAACTGAACAAACATTTGGGTCAATCGCCGAGAATGTCAAGTGTTTCAGATCAAAAGGGTCACTCTCCAGAAGGAAATGTCAGCGCTTTACAGCAAACTACTATAATGTCAGTCCCACCTCCGCCGCCACCACCGCCACCTCCTCCTCCTTTCAATCCTCTGGCACCCAGACAATGGGAAACTCAGACACCAACAACTCCTACTGACCAGCCTATCTCTAGGCCACCTGAACTAAAACGTCCTTCTAGGCCTTTTGTGTTGCAAGACCCAACAAAGGTTTCCCCTGTTGAGCTGCCTCCATGTGCTGAAAATGTGGAGACATCTGATGAGACTAGTAAACCAAAGTTAAAGCCGCTACATTGGGATAAAGTAAGAGCGAGCTCTGATCGTGAAATGGTGTGGGATCAACTGAGATCAAGCTCATTTAAATTAAACGAGGAGATGATAGAGACATTGTTTGTTGTCAACACGCCGAATCCGAGACCTAAGGAAACAACTCCAAGATCAGTTCTTCTAATGCAGAATCAAGAAAACAGAGTACTTGACCCAAAAAAGGCACAAAACATTTCCATTTTGCTTAGGGCTCTCAATGTAACAATAGAGGAAGTCTGTGAAGCCCTATTGGAAGGTAATGCAGATACACTTGGAACGGAATTGTTAGAAAGCTTATTGAAGATGGCACCAACTATGGATGAAGAACGGAGACTGAAGGAGTACAAAGATGACTCACCTATGAAGCTTGGTCCTGCCGAGAAATTTCTCAAGGCCGTACTTGATATCCCGTTTGCTTTTAAAAGAGTGGATGCCATGCTTTACATAGCCAATTTTGAGTCTGAAGTCGAGTACCTAAAAAAGTCTTTTCAAACTCTTGAGGTTGCCTGTGAAGAGCTTAGAAATAGTAGAATGTTTTTAAAGCTTCTAGAAGCTGTCCTCAAGACTGGTAACAGGATGAATGTTGGGACAAATCGCGGTGATGCCCAGGCCTTTAAGCTAGACACTCTTCTCAAGCTTATTGACGTCAAAGGTGCAGATGGAAAAACAACACTCTTGCATTTTGTTGTACAAGAAATCATAAGAACTGAAGGTGCTCGACTCTCTGTCGTTAATCAAATTCCAAATCCTGATCCGAATGATGACTCCACATGTAGGAAGCTTGGCCTGCAAATTGTTTCTGGTCTCTGTTGTGAGTTAACTAATGTGAAGAAAGCTGCAGCAATGGACTCAGAAGTGCTAAGCAATGAAGTCTCCAAACTATCTAGAGGAATTGCAGAAATTGCTGAAGTGGTTCGTTTAAACGAAAAAATGGGATTAGAAGAGAGCAGAAAAACATTTTCTGAATCAATGAACAAGTTCACGAGAATGGCAGAAGAGGAAATTCTCAAAATTCAAGCTCAAGAAAAAGTTACTTTATTTCTAGTCAAGGAGATAACAGAGTACTTCCATGGGAATTTAGCAAAGGAAGAAGCTCATCCTTTCAGAATTTTTATGGTTGTCAGAGACTTCTTGAATGTTCTTGACAGAGTCTGCAAAGAAGTCGGTATGATCAATGGACGAACCACAGTCAGTTCTGCATATAGATTTCCAGTTCCAGTGAACCCCATGTTACCTCAACCTCTACCAGGACTGTATGGGAAAAGAAACTACAGCTTATCTGACGATGAGAGTGCATCTCCTTAG 3315 0.4392 MFLSFCFISLLLSSATSTSAAIATTTQASRRILHQPFFPLGSLPPSQPPSPSPPSSPPLSPTPPNPKYPFSSTTPDQSPFFPTYPSPPPPPSPSNFASFPANISSLILPQSPKPKSSSSKLFAIAIAAVVSAAVVVVISLFFYCRRKRRYDFSDSKTHRSENSNRLFSNRVENNPTPNNSNHNGPPKVRASSSASSEFLYLGTIANSRGIDDRPEARNNGAGSGNSSGNDGLGLDPRKMDSPELHPLPPLARQNSMFHSGNVDVTSTGNDEEEFYSPRGSLDGRETFSGTGSGSRRVFFTIAGENFGRRNRDSSSNSCSSSTSDSPARSHSISLSPPVSLSPRRLQPKSPESTAVCAPQSSPPSAPQLIEKQRSSSPSPLSFPERKSDGSPRISHGPQQIVHSPSLSSLSSTPGRGFGVNGVSSSPSPPSTSPDRFLQKCTDEVSSTSARERVSNASEHTKLSSLSSSASSSPERFVEKNLYASSPRLSNASERYGKSVLASPVFSPSLLSSPERGWEKNLLQSPGVPNVSDQKRVFLHSPSSAEGELNKHLGQSPRMSSVSDQKGHSPEGNVSALQQTTIMSVPPPPPPPPPPPPFNPLAPRQWETQTPTTPTDQPISRPPELKRPSRPFVLQDPTKVSPVELPPCAENVETSDETSKPKLKPLHWDKVRASSDREMVWDQLRSSSFKLNEEMIETLFVVNTPNPRPKETTPRSVLLMQNQENRVLDPKKAQNISILLRALNVTIEEVCEALLEGNADTLGTELLESLLKMAPTMDEERRLKEYKDDSPMKLGPAEKFLKAVLDIPFAFKRVDAMLYIANFESEVEYLKKSFQTLEVACEELRNSRMFLKLLEAVLKTGNRMNVGTNRGDAQAFKLDTLLKLIDVKGADGKTTLLHFVVQEIIRTEGARLSVVNQIPNPDPNDDSTCRKLGLQIVSGLCCELTNVKKAAAMDSEVLSNEVSKLSRGIAEIAEVVRLNEKMGLEESRKTFSESMNKFTRMAEEEILKIQAQEKVTLFLVKEITEYFHGNLAKEEAHPFRIFMVVRDFLNVLDRVCKEVGMINGRTTVSSAYRFPVPVNPMLPQPLPGLYGKRNYSLSDDESASP* 1105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00259 1104 MobiDBLite consensus disorder prediction 254 273 - -
Pte1g00259 1104 MobiDBLite consensus disorder prediction 543 662 - -
Pte1g00259 1104 MobiDBLite consensus disorder prediction 166 192 - -
Pte1g00259 1104 SMART it6_source 652 1066 IPR015425 -
Pte1g00259 1104 MobiDBLite consensus disorder prediction 80 95 - -
Pte1g00259 1104 MobiDBLite consensus disorder prediction 42 95 - -
Pte1g00259 1104 Pfam Formin Homology 2 Domain 655 1051 IPR015425 -
Pte1g00259 1104 MobiDBLite consensus disorder prediction 392 475 - -
Pte1g00259 1104 MobiDBLite consensus disorder prediction 307 475 - -
Pte1g00259 1104 Gene3D Formin, FH2 domain 651 1060 IPR042201 -
Pte1g00259 1104 MobiDBLite consensus disorder prediction 582 601 - -
Pte1g00259 1104 MobiDBLite consensus disorder prediction 153 192 - -
Pte1g00259 1104 MobiDBLite consensus disorder prediction 42 70 - -
Pte1g00259 1104 MobiDBLite consensus disorder prediction 547 581 - -
Pte1g00259 1104 MobiDBLite consensus disorder prediction 307 383 - -
Pte1g00259 1104 ProSiteProfiles Formin homology-2 (FH2) domain profile. 652 1077 IPR015425 -
Pte1g00259 1104 PANTHER FORMIN-RELATED 403 1085 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Pte1g00259 1104 SUPERFAMILY Formin homology 2 domain (FH2 domain) 586 1058 - -
Pte1g00259 1104 MobiDBLite consensus disorder prediction 209 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00259 Pte-Chr1 2719217 2723811 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00259 605 1092 FH2 protein (formin) Gene Family AT3G25500 74.239 0.0 729
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00259 - - qsa:O6P43_017041 1198.73