Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00246 ATGCTCACCGATGGATCACTATCCAAAAGAAGCACAGATCCTGGACATTCTAATGGGATGGTGCTTAGTGCAGCCACTACCATGTGGCTTCCAATTTCTCCACAAAATGTCTTTAACATCTTCAAGGATGAAAGAAACAGATCTCAGGCTTTGAATACAAGTCAGAACAACATGCTGATACTCCAAGAGAGCTGCATAGATTCATCTGGTTTTTTAGTAGTTTATTCTCCAGTGGATTTGCCAGCATATCAATGTAGCTATGAGTGGGGAGGACCCTTCATACATTCCACTGCTACCATCAGGATTTACGATCTCACCAGATGGTCAACCAGACCAAGGAGAAGGATCTTCAACAAGCTCACATACACATGGTAG 375 0.4293 MLTDGSLSKRSTDPGHSNGMVLSAATTMWLPISPQNVFNIFKDERNRSQALNTSQNNMLILQESCIDSSGFLVVYSPVDLPAYQCSYEWGGPFIHSTATIRIYDLTRWSTRPRRRIFNKLTYTW* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00246 124 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 7 87 IPR042160 -
Pte1g00246 124 SUPERFAMILY Bet v1-like 16 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00246 Pte-Chr1 2597757 2598767 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00246 18 82 Homeobox Transcription Factor Family AT1G17920 51.020 2.05e-21 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00246 K09338 - jre:108993026 113.62