Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00241 ATGAACTTCAGTGTTTCACTCACTATTTCATATATGTGTGTGTGTGTGTGTATATATATATATATATATCTTCAGGATGATGAAGTTGCAACATCATGGTTGAATGATAAAGGGGTTAGAAAAGCTTTGCACACCATAGATGAAAGCTTTATCGATAAATGGGAGTTATGTACAGACAGAATTATATTTGATCATGATGCTGGAAGCATGATCAAGTATCACAAGAACCTGACAATGAAGGGATATCGAGCTCTAATATACAGTGGTGATCACGACATGTGTGTTCCATTCACGGGAAGTGAAGCATGGACAAGATCCCTAGGATACAAGGTCGTTGATGAGTGGAGGCCTTGGAAATCCAATGGACAAGTTGCTGGGTACACAAGAGGATATGACAATAATCTGACCTTTCTGACCGTAAAGGGTGCTGGGCATACAGTTCCAGAATACAAGCCTAAAGAGGCATTGGACTTCTATAGTCGCTTTTTGGCTGGAGAACCTATATGA 507 0.3984 MNFSVSLTISYMCVCVCIYIYIYLQDDEVATSWLNDKGVRKALHTIDESFIDKWELCTDRIIFDHDAGSMIKYHKNLTMKGYRALIYSGDHDMCVPFTGSEAWTRSLGYKVVDEWRPWKSNGQVAGYTRGYDNNLTFLTVKGAGHTVPEYKPKEALDFYSRFLAGEPI* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00241 168 FunFam Carboxypeptidase 70 165 - -
Pte1g00241 168 Gene3D alpha/beta hydrolase 13 167 IPR029058 -
Pte1g00241 168 Pfam Serine carboxypeptidase 26 164 IPR001563 GO:0004185|GO:0006508
Pte1g00241 168 ProSitePatterns Serine carboxypeptidases, histidine active site. 135 152 IPR033124 GO:0004185
Pte1g00241 168 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 30 152 IPR001563 GO:0004185|GO:0006508
Pte1g00241 168 SUPERFAMILY alpha/beta-Hydrolases 18 168 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00241 Pte-Chr1 2558134 2559668 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00241 29 169 Calmodulin-binding Proteins AT2G22960 51.064 1.58e-47 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00241 K16296 - cave:132166195 263.462