Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00218 ATGGAGCTTGGAGATGGTTCTTGTGGCAATGTATATAAAGCCCGTGACATGAGGACGTATGAAATTGTTGCTGTCAAAAAGTTGAAAAGGAGGTTTTATTTCTGGGAAGAATACACAAGGCTAAGAGAAATTAAGGCACTTCGTAAAATGAATCACCCTAATATTATAAAGTTGAAAGAGGTTGTCAGGGAAAACAATGAATTGTTTTTCATTTTTGAATACATGGAGAATAATCTGTATCAAGTAATGAAGGAAAGACAAAGGCCCTTCTCAAAGGAAGATATACAACGATTTATGAGTCAACTCTTTCGGGGACTAAGTCACATGCATAGGATTGGATACTTCCATCGGGATTTAAAACCTGAGAATTTGCTGGTGACTAATGATCTTCTTAAGATTGCCGATTTTGGACTTGCTAGAGAAGTATCGTCAATGCCTCCATATACTCAATATGTATCAACACGGTGGTACCGTGCACCTGAAGTCCTGTTGCAATCTCCTTATTATACACCTGCAGTTGACATGTGGGCTGCTGGTGCTATAATGGCTGAGCTCTATATTCAATCTCCTATATTCCCGGGAGAAAGTGCAATAGATCAATTGTACAAGATTTGTAATATTCTCGGTCCACCAGACTGGGCCTCTTTTCCATTTGAGATAAATGCCTCCCGGTTACTGGATTCTATTGGTTATGATGAGGTTCTCCCAGCACATCTTTCTGATATCATTCCTACTGCTAGTCCAGAAGCTATAGATTTAATCAAGCAATTATTGTCCTGGAATCCATCAAGAAGGCCATCTGCAGATGCATCACTGCAGCACCCCTTTTTCCATGTGGAGACATGGGTTCCTTACCCGCTGCGAGACCCACTTGAGCTGAAACTGAGCAGCACAGCAAGTGCAAAGCCCAATCTTGAGTTGAAATTGCATGATTTTGGCCCTGATCCTGAAGAATGTTTTCTTGGTTTAACATTGGCTGTGAAGCCCAGTGCAAGCTTAGATGTGGTCCACGGCATATCCCAAGCTATGGGGGAGGTATTTTGCACGAGTATTAACAACCAGTCAGATCAACCAGTTTTCTGGTCACTGATATCACCTGTTCATGAGGAGAATCAAGCTCCTGTGGACTCTTCTCTATCATTGTCATTCAGCTCAATACAACATGCACCAACTGAGGTTCCAGAATCAACTGGTTTCTCCATTCAGTCATTGCAACCAAATTTCTTACCTGGACCTTTTTTGGCTTTGTCGTCACCCTACCAGCAGGGTCAATACAGTTAA 1281 0.4184 MELGDGSCGNVYKARDMRTYEIVAVKKLKRRFYFWEEYTRLREIKALRKMNHPNIIKLKEVVRENNELFFIFEYMENNLYQVMKERQRPFSKEDIQRFMSQLFRGLSHMHRIGYFHRDLKPENLLVTNDLLKIADFGLAREVSSMPPYTQYVSTRWYRAPEVLLQSPYYTPAVDMWAAGAIMAELYIQSPIFPGESAIDQLYKICNILGPPDWASFPFEINASRLLDSIGYDEVLPAHLSDIIPTASPEAIDLIKQLLSWNPSRRPSADASLQHPFFHVETWVPYPLRDPLELKLSSTASAKPNLELKLHDFGPDPEECFLGLTLAVKPSASLDVVHGISQAMGEVFCTSINNQSDQPVFWSLISPVHEENQAPVDSSLSLSFSSIQHAPTEVPESTGFSIQSLQPNFLPGPFLALSSPYQQGQYS* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00218 426 CDD STKc_MAK_like 2 277 - -
Pte1g00218 426 Pfam Protein kinase domain 2 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g00218 426 SMART serkin_6 1 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g00218 426 FunFam Serine/threonine-protein kinase MHK 1 76 - -
Pte1g00218 426 ProSitePatterns Serine/Threonine protein kinases active-site signature. 114 126 IPR008271 GO:0004672|GO:0006468
Pte1g00218 426 ProSiteProfiles Protein kinase domain profile. 1 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g00218 426 Gene3D Phosphorylase Kinase; domain 1 2 74 - -
Pte1g00218 426 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 2 302 - -
Pte1g00218 426 Gene3D Transferase(Phosphotransferase) domain 1 75 277 - -
Pte1g00218 426 SUPERFAMILY Protein kinase-like (PK-like) 3 278 IPR011009 -
Pte1g00218 426 FunFam Mitogen-activated protein kinase 75 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00218 Pte-Chr1 2314287 2320751 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00218 3 277 MAP Kinase Gene Family AT4G01370 39.236 1.49e-60 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Pte1g00218 Pkinase 3.5e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00218 K08829 K08830 qsa:O6P43_026704 637.876