Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00193 ATGGAGCACTACAAGGAGACATACAATTTCATAGGTGCAATGTGCCTGAAGTCTGCTGTTCAGCTGGCCATACCTGATAAAATTTGCAACCATGGAAAACCAATTACTCTCCCTGAATTGGTATCAGCACTTCAACTTCACCCAACCAAAACGAGTGGCCTCAATCAGCTCCTGAGGTATCTAGTTTCTATGGGGTTATTCTCCAAAACCAAAATAAATGAAGATTATGCATATGTTCTTGGTCCTTGCTCCGATCTTCTCCTTAGTGATTTAGAATCTACTTTGAGTCGTGCTAACTCATCTGCAGCAGCAGTACTGGGGCCCCTTCATCCTGTGTTGTTGAAAGCTTGGCAGAATTTAGGAAAATGGTTCCTAGAGGAAAAGTCAGTTTCCCCATTTGAGAATACACATGGGGTTGGCTTTTGGGACTATGTTAGCAACAGTCCTGATGGTCATCATTTCAATGAATCAATGGAGAATGATTCTAAAATGTTTAATCAGTTTGTTCTCAAAAGTTGTTTGCCAGCATTCGAAGGATTGAGCTCAGTAGTTGATGTTGGAGGTGGCACTGGAGCAGTGGGAAACTCTATTTGTGAGGCATATCCTCAATTGAAGTGCACTGTTTTTGATCTCCCAAAGGTTGTAGAGTCTGTACCCAAACAAAACGATGGTAACTTGAACTTTGTTGGAGGTGACATGTTTCATTCCATCCCTGCGGCTGATGCTGTACTCATGAAGTGGGTTCTGCATAATTGGAGTGATGAGGATTGTCTATTGATTCTTAAAAATTGCAAAGATGCCATTGCTCACAAAGGGAAAGAAGGGAAGGCAATCATCGTTGACATAGTTCTGGATGAGGAGAATGACAAGAAGGAATTAACAGAAGCGAAACTCATATTTGATATGACAATGATGGTTTTATTCAATGCAAAAGAAAGAGATGGGAAAGAATGGAACAAGTTGCTTCTGCAAGAAGCTGGTTTCAGGGATTATAAGATAACACCTTTGCTTGGTTTTAGGTCTCTCATTGAGGTCTTCGCTTAA 1044 0.41 MEHYKETYNFIGAMCLKSAVQLAIPDKICNHGKPITLPELVSALQLHPTKTSGLNQLLRYLVSMGLFSKTKINEDYAYVLGPCSDLLLSDLESTLSRANSSAAAVLGPLHPVLLKAWQNLGKWFLEEKSVSPFENTHGVGFWDYVSNSPDGHHFNESMENDSKMFNQFVLKSCLPAFEGLSSVVDVGGGTGAVGNSICEAYPQLKCTVFDLPKVVESVPKQNDGNLNFVGGDMFHSIPAADAVLMKWVLHNWSDEDCLLILKNCKDAIAHKGKEGKAIIVDIVLDEENDKKELTEAKLIFDMTMMVLFNAKERDGKEWNKLLLQEAGFRDYKITPLLGFRSLIEVFA* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00193 347 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 102 345 IPR029063 -
Pte1g00193 347 Pfam O-methyltransferase domain 117 329 IPR001077 GO:0008171
Pte1g00193 347 Gene3D Vaccinia Virus protein VP39 96 347 IPR029063 -
Pte1g00193 347 CDD AdoMet_MTases 183 273 - -
Pte1g00193 347 PIRSF O-mtase 1 347 IPR016461 GO:0008168
Pte1g00193 347 Pfam Dimerisation domain 14 62 IPR012967 GO:0046983
Pte1g00193 347 PANTHER O-METHYLTRANSFERASE 14 332 IPR016461 GO:0008168
Pte1g00193 347 FunFam O-methyltransferase ZRP4 96 347 - -
Pte1g00193 347 SUPERFAMILY "Winged helix" DNA-binding domain 4 90 IPR036390 -
Pte1g00193 347 Gene3D - 1 87 IPR036388 -
Pte1g00193 347 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 4 347 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00193 Pte-Chr1 1972236 1974137 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00193 14 334 Monolignol Biosynthesis Gene Families AT5G54160 33.739 1.02e-44 155