Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00188 ATGGATTCACCACCTGCTCCTCCTAGACCTTCCGCCACCACAACCTCACCCACCAAGAAACCACAACCTATGCCGTGGACACATCAAGAAACTCTCAATCTCATCAAAGCTTATCAAGATAAATGGTACTCTCTCAAGCGCGGTCAACTTCGCACGAACCAATGGGAAGAGGTTGCAGTCACTGTGGCTGCCCGTTGTGGCTATGATTACAACGAGCCATCTAAATCTGCTATCCAGTGCCGTCATAAAATGGAGAAGCTTCGTCAGCGTTACCGTACTGAGAAACAAAGGTTAGCCACAGCTTCAAATTCAGGTTCTAGAGGTATTTGTAGTTATTGGCAATATTATCAGCTCATGGAAAAATTGGAACTTGGTCCTTTACCTATCTCTGCGAGACCGCTTGCTCCTTGTAGTTATAACTCTGAGGATGTTAACTTGAATATTGACGATGGTCGGTATATGGTACAAGAGGATGAGGACGAAGAGGAAGAGGAAGAGGATGATATTTATAGCAAGTCAAGGAGTATGAATTGTATACTACAGCAGAGAAAACCCAATTTTGTTGATAGCTTTAACGGAGGCATGAAAATTTTTGCAAGAGACCGAAGTGAAAAGAAGAGTTGGAGGTTCATGAAGGAGGTGAAGGAGGAGATGGAGGATGAGGAAGTGGCAGAAAAGGGAGGAAAAGGAAGAGACTTGATGTCAGAATTGGCTGCTGAAATAAGAACTTTTGGTGAGAGGTTTATAGGGTTGCAGAATTTGCAGATGGAGATAACAAGAGAGACTGAGAGGTGTAGGCTAGAGATGGAGAATAAGAGAACGGAGATGATTCTTAAGTCGCAGCAAAGAATGGTTGATTCTATTGAGAAGATGTTAGGATTTTCCAAGAAGATGAAGATGAGCCATGAGATTTGA 915 0.4306 MDSPPAPPRPSATTTSPTKKPQPMPWTHQETLNLIKAYQDKWYSLKRGQLRTNQWEEVAVTVAARCGYDYNEPSKSAIQCRHKMEKLRQRYRTEKQRLATASNSGSRGICSYWQYYQLMEKLELGPLPISARPLAPCSYNSEDVNLNIDDGRYMVQEDEDEEEEEEDDIYSKSRSMNCILQQRKPNFVDSFNGGMKIFARDRSEKKSWRFMKEVKEEMEDEEVAEKGGKGRDLMSELAAEIRTFGERFIGLQNLQMEITRETERCRLEMENKRTEMILKSQQRMVDSIEKMLGFSKKMKMSHEI* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00188 304 MobiDBLite consensus disorder prediction 1 26 - -
Pte1g00188 304 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 9 291 IPR044823 -
Pte1g00188 304 Gene3D - 26 93 - -
Pte1g00188 304 SMART 118neu2 33 127 IPR006578 -
Pte1g00188 304 Coils Coil 251 271 - -
Pte1g00188 304 Coils Coil 84 104 - -
Pte1g00188 304 FunFam Trihelix transcription factor ASIL2 26 93 - -
Pte1g00188 304 ProSiteProfiles Myb-like domain profile. 25 88 IPR001005 -
Pte1g00188 304 Pfam Myb/SANT-like DNA-binding domain 24 122 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00188 Pte-Chr1 1931808 1934284 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00188 26 122 Trihelix Transcription Factor Family AT3G14180 32.990 4.48e-12 64.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pte1g00188 Myb_DNA-bind_4 7.7e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00188 - - qsa:O6P43_016862 306.605