Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00164 ATGGCAAGGTTGAAACTTTTCTCTCTCTATATTTTCGTCACTCTCCCCTTCCTCTATCACTCCACTGCTACTAGTTTAACTGAGTCTCTGTCTTCTTCTACTGCTTCCTCTGATGTTGTGCTTCTGTTTGGAAAAATCAGAGCTTCACTTCAAGGTCACAATGAGAACCTACTGTTATCTTCATGGAACTCCTCTGTTCCTCTGTGCCAATGGAGGGGAGTCAAGTGGGTCTTCTCTGATGGTTCTCCTTTGCTATGCAATGACTTGGCTTCACCACAATGGACTAACCTTTCACTTTACAAAGACCCATCTCTGCATTTGCTATCGCTCCAACTTCCTTCTGCTAATCTCTCTGGTTCTCTTCCCAGAGAAATAGGTGTGTTCCCCATGCTTCAAAGTATCTACCTTAACATAAACTACCTGAGTGGCAGTATTCCTCTTGAGCTCGGCTATAGCTCTTCCCTCTCTGACATTGATTTGAGTATGAACATGTTGAGTGGAGCACTGCCTCCATCGATATGGAATTTGTGTGATAAGTTGGTTTCTCTTAGACTTCATGGAAATTCACTTTCTGGTTCTCTCCCTGAACCAGCATTGCCAAACTCCACTTGCAAGGATCTGCAAGACCTTGACTTGGGTAACAACAACCTATCTGGGAACTTCCCAGAGTTTATTACTCATTATAGTGAGCTGAAACAGCTTGATCTAGGAGACAACATGTTTTCTGAGTCTATTCCACAGAGTTTAGCAGGGCTTAACCTTGAAAAATTAAACCTTTCCCATAATAACTTCAGTGGGGTTTTGCCTGTTTTTGGAGAGTCCAAGTATGGGGTAGAGGTTTTCGAAGGCAATAGTCCTAGCCTATGTGGGGCTCCCTTGGAAAATTGTATGGCAAACTCTAGATTAAGTTCTGGTGCAATTGCTGGGTTAGTAATAGGTCTCATGACTGGGGCTGTGGTTTTAGCTTCATTACTGATTGGTTATGCACAAAATAAGAAGAGAAATAGTAAAAGAGAGAGTGAAGATGAACTGGAAGAAGGTGGATATGAACAGAATGACGAGAATGCTGATTCTGGTGGTGAAGGGAAGCTCATATTGTTTGCTGGTGGTGAGCATTTGACACTGGAGGATGTGTTGAATGCAACAGGACAGGTTTTGGAGAAGACATCTTATGGAACCATTTACAAGGCAAAGCTTGCTGATGGAGGAACAATTGCATTGAAGTTGTTGAGAGAAGGAAGCTGTAAAGATAGGGCCTCGTGTTTGCCAGTGATAAAGCAACTGGGGAAAATTCGACATGAGAATTTGGTTCCCCTGAGAGCTTTTTATGAAGGGAAGAGAGGGGAAAAGCTCCTTATCTATGACTATCATCCTCACAAAACCCTTCATGATCTGTTGCATGAAACTAAGACAGGAAGACCTGTGCTCAATTGGGCTCGGCGACACAAGATTGTATTAGGCATAGCTAAGGGACTTGCTTATCTCCATAATGGACTTGACACACCCGTAACGCATGGCAATGTGAGATCCAAGAATGTGCTTGTGGACGATTTTTTTGTGGCCAGACTCACCGAGTTTGGACTTGATAAGCTGATGATTCCATCTGTAGCAGACGAAATTGTTGCACATGCAAAGACTGATGGTTACAAGGCTCCGGACCTTCAAAAAATGAAGAAATGTAACCCCAGGACAGATGTCTATGCATTTGGGATATTACTATTGGAGATATTGATAGGAAAGAAGCCAGGTAAAGGTGGGAGAAATGGTGAATATGTGGATTTGCCTTCAATGGTGAAAGTGGCAGTGTTGGAGGAGACGACAATGGAAGTGTTTGATATGGAGATTTTGAAGGGGATAATGAGTCCAATGGAAGATGGTTTGGTCCAAGCATTGAAGCTTGCCATGGGGTGCTGTGCACCAGTGGCAACAGTTAGACCTTCCATGGATGAGGTTGTGAAGCAGCTAGAGGAGCATAGACCAAGAAATAGGTCAGCATTGTACAGTCCCACTGAAACAAGAAGTGGGAGTGGCACTCCATTTTGA 2043 0.4342 MARLKLFSLYIFVTLPFLYHSTATSLTESLSSSTASSDVVLLFGKIRASLQGHNENLLLSSWNSSVPLCQWRGVKWVFSDGSPLLCNDLASPQWTNLSLYKDPSLHLLSLQLPSANLSGSLPREIGVFPMLQSIYLNINYLSGSIPLELGYSSSLSDIDLSMNMLSGALPPSIWNLCDKLVSLRLHGNSLSGSLPEPALPNSTCKDLQDLDLGNNNLSGNFPEFITHYSELKQLDLGDNMFSESIPQSLAGLNLEKLNLSHNNFSGVLPVFGESKYGVEVFEGNSPSLCGAPLENCMANSRLSSGAIAGLVIGLMTGAVVLASLLIGYAQNKKRNSKRESEDELEEGGYEQNDENADSGGEGKLILFAGGEHLTLEDVLNATGQVLEKTSYGTIYKAKLADGGTIALKLLREGSCKDRASCLPVIKQLGKIRHENLVPLRAFYEGKRGEKLLIYDYHPHKTLHDLLHETKTGRPVLNWARRHKIVLGIAKGLAYLHNGLDTPVTHGNVRSKNVLVDDFFVARLTEFGLDKLMIPSVADEIVAHAKTDGYKAPDLQKMKKCNPRTDVYAFGILLLEILIGKKPGKGGRNGEYVDLPSMVKVAVLEETTMEVFDMEILKGIMSPMEDGLVQALKLAMGCCAPVATVRPSMDEVVKQLEEHRPRNRSALYSPTETRSGSGTPF* 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00164 680 FunFam Leucine-rich repeat receptor-like protein kinase 204 296 - -
Pte1g00164 680 Pfam Protein tyrosine and serine/threonine kinase 383 655 IPR001245 GO:0004672|GO:0006468
Pte1g00164 680 Pfam Leucine rich repeat 207 264 IPR001611 GO:0005515
Pte1g00164 680 MobiDBLite consensus disorder prediction 657 680 - -
Pte1g00164 680 MobiDBLite consensus disorder prediction 665 680 - -
Pte1g00164 680 Gene3D Ribonuclease Inhibitor 42 178 IPR032675 -
Pte1g00164 680 MobiDBLite consensus disorder prediction 335 357 - -
Pte1g00164 680 Pfam Leucine rich repeat N-terminal domain 46 74 IPR013210 -
Pte1g00164 680 Gene3D Phosphorylase Kinase; domain 1 365 456 - -
Pte1g00164 680 ProSiteProfiles Protein kinase domain profile. 380 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g00164 680 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 25 196 IPR046959 -
Pte1g00164 680 SUPERFAMILY Protein kinase-like (PK-like) 383 656 IPR011009 -
Pte1g00164 680 Gene3D Transferase(Phosphotransferase) domain 1 458 672 - -
Pte1g00164 680 SUPERFAMILY L domain-like 69 271 - -
Pte1g00164 680 Gene3D Ribonuclease Inhibitor 179 298 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00164 Pte-Chr1 1678851 1682215 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00164 1 681 Receptor kinase-like Gene Family AT3G24660 73.900 0.0 945
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pte1g00164 PK_Tyr_Ser-Thr 7e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00164 - - jre:109006053 1063.91