Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte1g00161 | ATGTCAGATTCCCTTCCAATTTCTCCAGCCTCTGCAGATCACCATGAAATTCAAATCAGCACTCTTTTCATGGGCCTAATTGGTGTCATCACTGGAGCTATTGCAGTCATAACCTACCAGTGTATTACGGCTTGTTTCAGGCAAAGAACTGAAGAAAGGGAAGAAGAACCTGGTGTGCCTAATACTCAAATGCGTAGCAGAAGTATTGTTACAACGAATCCAACGGTGGCAATGCTTCCGGTTTCTCGGTACAGCAAGAATTTGAATGAGCAGACTTGTGCTGTGTGCTTGTCTGAGTTTAAAATCGGCGCGCGGATTCGGGTGCTGCCGATTTGCCTGCATGTATTTCATGTAAGCTGCATTGACAAATGGCTAAACCAGCATGCAAACTGCCCACTTTGTAGAAATGGGATTGCTGCAAATTCACATGATGTGGTTTTGGCAATGCCAGCTGACAACATTCAGACAACAATAGCATCACTGCATCTATACACGTGA | 498 | 0.4458 | MSDSLPISPASADHHEIQISTLFMGLIGVITGAIAVITYQCITACFRQRTEEREEEPGVPNTQMRSRSIVTTNPTVAMLPVSRYSKNLNEQTCAVCLSEFKIGARIRVLPICLHVFHVSCIDKWLNQHANCPLCRNGIAANSHDVVLAMPADNIQTTIASLHLYT* | 166 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte1g00161 | 165 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 71 | 142 | IPR013083 | - | |
Pte1g00161 | 165 | CDD | RING-H2_EL5-like | 93 | 135 | - | - | |
Pte1g00161 | 165 | PANTHER | RING-H2 FINGER PROTEIN ATL51-RELATED | 13 | 139 | IPR044675 | - | |
Pte1g00161 | 165 | SMART | ring_2 | 93 | 134 | IPR001841 | - | |
Pte1g00161 | 165 | Pfam | Ring finger domain | 92 | 135 | IPR001841 | - | |
Pte1g00161 | 165 | SUPERFAMILY | RING/U-box | 86 | 139 | - | - | |
Pte1g00161 | 165 | ProSiteProfiles | Zinc finger RING-type profile. | 93 | 135 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte1g00161 | Pte-Chr1 | 1661535 | 1662032 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte1g00161 | 19 | 153 | C3H Transcription Factor Family | AT2G27940 | 30.612 | 8.65e-19 | 78.6 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte1g00161 | - | - | ghi:107892496 | 126.331 |