Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00151 ATGACATTGAATGCAAACGTTTTTTACATGGACCAGTGTTATAAAAAACGTCATTACTTTGAAAACTACCGGAGGGCGACTGTACCTATGAGGCCTGCCAAGGGTGGATGGACAGCTCAAGAGGATGAGACATTAAGAAAGGCCATTGCACGTTATAGGGGGACAAGTTGGAAGAAAATAGCATCAGTATTTATATTAAAGAATGATAACCCTAGCTTCTGTTAA 225 0.4 MTLNANVFYMDQCYKKRHYFENYRRATVPMRPAKGGWTAQEDETLRKAIARYRGTSWKKIASVFILKNDNPSFC* 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00151 74 ProSiteProfiles Myb-like domain profile. 34 74 IPR001005 -
Pte1g00151 74 CDD SANT 37 70 IPR001005 -
Pte1g00151 74 Pfam Myb-like DNA-binding domain 34 64 IPR001005 -
Pte1g00151 74 Gene3D - 29 71 - -
Pte1g00151 74 SUPERFAMILY Homeodomain-like 29 68 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00151 Pte-Chr1 1565818 1567461 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00151 24 64 MYB Transcription Factor Family AT5G02320 63.415 2.11e-13 61.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pte1g00151 Myb_DNA-binding 4.9e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00151 K09422 - qsu:111993003 67.3958