Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00145 ATGGGAGCTTGCTGGAGTAATCGAATTAAGGCTGTGAGTCCTTCGCATACTGGGTTTACTTCGAGGAGTGTGAGCAGAGATGGCAGTGACACCGGTTCAAGTAGCAAGATGTCATCATCATCTTTACCTTTAACTCCTCGTAGTGAGGGTGAGATTTTACAATCCTCCAATTTGAAGAGCTTCAGCTTCAGTGAACTCAAAACATCCACGAGGAACTTTCGTCCTGATAGTGTCCTAGGGGAGGGTGGGTTTGGTTCAGTTTTCAAGGGGTGGATTGATGAAAATTCACTCGCAGCTTCTAGGCCTGGAACTGGCATGGTAATTGCTGTGAAAAGGCTTAACCAAGATGGTTTCCAAGGGCACAAGGAATGGTTGGCAGAAATAAATTACCTTGGGCAGTTTCATCATCCTAACCTTGTGAAGTTGATAGGTTATTGTTTGGAGGATGAGCAAAGACTCTTGGTTTACGAGTTCATGCCAAAAGGAAGCATGGAAAATCATTTATTCAGAAGAGGATCTCACTTTCAGCCTCTTTCTTGGAGCCTACGGTTGAAAATCGCCCTTGGTGCTGCGAGGGGACTTGCATTTCTTCACAGTACTGAGCCGAAAGTCATATATCGCGACTTCAAGACTGCCAACATCCTGCTTGATTCTAATTACAATGCCAAACTCTCTGATTTTGGGCTGGCTAGAGATGGACCTATTGGTGATAAGAGCCATGTCTCTACTAGGGTCATGGGTACTCACGGATATGCTGCACCAGAGTATCTAGCTACAGGTGCTGTCTATATGAATTTTCTTCCAATAAACACACAATCTATGCAATTGAAACTGGTCTTGGCTAGATTCTATATAATCGATACTACCCACTATATTTGTTTCTTCAATGAATTCCATACTATCAATATATAG 912 0.4309 MGACWSNRIKAVSPSHTGFTSRSVSRDGSDTGSSSKMSSSSLPLTPRSEGEILQSSNLKSFSFSELKTSTRNFRPDSVLGEGGFGSVFKGWIDENSLAASRPGTGMVIAVKRLNQDGFQGHKEWLAEINYLGQFHHPNLVKLIGYCLEDEQRLLVYEFMPKGSMENHLFRRGSHFQPLSWSLRLKIALGAARGLAFLHSTEPKVIYRDFKTANILLDSNYNAKLSDFGLARDGPIGDKSHVSTRVMGTHGYAAPEYLATGAVYMNFLPINTQSMQLKLVLARFYIIDTTHYICFFNEFHTINI* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00145 303 Gene3D Transferase(Phosphotransferase) domain 1 159 266 - -
Pte1g00145 303 PANTHER OS01G0588500 PROTEIN-RELATED 37 264 - -
Pte1g00145 303 Gene3D Phosphorylase Kinase; domain 1 48 158 - -
Pte1g00145 303 ProSiteProfiles Protein kinase domain profile. 73 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g00145 303 FunFam Serine/threonine-protein kinase BIK1 40 158 - -
Pte1g00145 303 Pfam Protein tyrosine and serine/threonine kinase 77 261 IPR001245 GO:0004672|GO:0006468
Pte1g00145 303 MobiDBLite consensus disorder prediction 13 49 - -
Pte1g00145 303 SUPERFAMILY Protein kinase-like (PK-like) 46 260 IPR011009 -
Pte1g00145 303 ProSitePatterns Protein kinases ATP-binding region signature. 79 111 IPR017441 GO:0005524
Pte1g00145 303 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00145 Pte-Chr1 1503092 1505848 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00145 20 289 Glycoside Hydrolase AT3G07070 46.043 2.92e-79 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pte1g00145 PK_Tyr_Ser-Thr 4.4e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00145 - - qsa:O6P43_016765 459.914