Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00142 ATGACAAATCTTTTGAGCCTTTGTTTCTATGCTTTATCAGTCCTTTCTATCCCAGTTTCATCACAGCCTAACCAACTCTTGTATGCAGGATTCAATGATGCTGCTTCCAATCTAACCTTAACTGGGGTTGCAGAGATTGAGAAGAATGGTATATTGAAGTTGACGAGTGATACCAGTAGATTAATGGGGCATGCTTTCTTTGCATCTCCATTCCAGCTGAAGAACTCGACAACTGGTAAAGCTTATTCGTTTTCAACTTGCTTTGCTATGGCTATAGTCCCTGAGTATCCAAAGTTAGGGGGACATGGTTTGGCTTTTACCATCGCAACTACCAAGTATCTCAAAGCTTTACCTAGTCAGTACCTAGGACTTCTCAATTCATCGGATGTCGGTAACTTTACCAACCATCTCTTTGCTGTCGAATTTGACACTGTCCAAGACTTTGAGTTCGGGGACATCAATGACAACCATGTTGGAATCGACATTAACAGCATGGTGTCTAATAAATCAGCACCTGTAGCTTATTATGCTGACGATTCAACCTTGCAAAACCTCACTCTCAAAAGTGGGAATCCAATACTAGCATGGGTTGACTATGATTCAGCTCGAAGTGTTATCAATATTACACTTTCCCCTACTTCTACAAAACCCAAAAGGCCTATCTTGTCTTTCAATGTTGATCTCTCACCAATTCTCCATGAGTATATGTATGTGGGGTTTTCTGCTTCAACTGGTTTGCTAGCAAGCTCTCATTACATTTTGGGATGGAGCTTTAAAATTAAAAACGGTGCAGCATCAGCCCTTGATCTATCTTCTCTTCCAAAACTCCCAGAACCTAAGAAGAAACAGACATCGCTTGTCACAGGTGTTACAGTCTCAGTTGTTGTTTTTGTATTGTCTGCAATATCTATTGCCATTTACCTCTTCAGAAAAATCAAGAATGCTGATGTAATTGAGGATTGGGAGCTTGAAATCGGTCCTCACAGGTATACATATCAAGAACTGAAGAGAGCAACCAAAGGTTTCAAAGACAAAGAGCTGCTTGGGCACGGTGGATTTGGACGAGTCTATAGAGGAACTCTCCCATATTCAAAGACTGTGGTTGCAGTAAAGAGAATTTCACATGATTCAAGACAAGGACTAAGGGAATTTGTAGCAGAGATTGCGAGTATCGGCAGGCTGCGCCATCGGAATTTGGTTCAACTATTAGGTTGGTGTAGAAGGCGAGGTGACCTGTTGCTTGTGTATGATTATTTGGCCAATGGAAGCTTGGATAAGTACTTGTTTGATGAGCCAAAAACAGTGTTAACTTGGAAACAAAGGTTTAAGATCGTAAAGGATGTTGCCTCTGGGCTTCTCTATCTACATGAGGGCTATGAACAAGTAGTGCTTCATAGAGACGTGAAAGCCAGCAATGTATTGCTAGACAGTGAAATGAATGGAAAGCTTGGAGATTTTGGACTTGCAAGACTGTATGAACATGGTGCAAACCCTAGTACCACAAGGGTAGTAGGGACTTTAGGGTATCTAGCACCAGAGACGCCTCGAACAGGCAAGTCAACCACAGGCTCAGATGTGTTTTCATTTGGCGCATTTTTGCTTGAAGTGGTTTGTGGACGCAGGCCGATTGATCCAAAGGCAGGTCAGGATGAGTTGGTTTTAGTGGATTGGATTTGGGAGAGGTACAAACAAGGGATGATGCTTGATGTGGTTGATCCAAAGTTAAATGGACAATACAATGAAAGTGAGGTGTTGTTGGTGTTGAAACTGGGTATGCTTTGCTCAGTCACTGAGCCATCAGGAAGGCCAAGTATGAGGCAGGTAGTGAGGTACTTGGAAGGTGAGATCAGATTGCCAGAGGATTTGAGAGAAGCGATTGGGTGTAGTGAAAGTATTACTAGAAAGGGGGAAGGGTTTGATGCTTTTCTGAACTCATTTTCTTCATCTTCATCTGATAGGATGACTTCATTTCCATTCACTGATAACAACAGACGTCTCAATCCTAATAGTAAGGTATCTTTTCCTGCCTCACCTCTTTCTCTTCTTCATGGGGAAACAAGGTGA 2064 0.4215 MTNLLSLCFYALSVLSIPVSSQPNQLLYAGFNDAASNLTLTGVAEIEKNGILKLTSDTSRLMGHAFFASPFQLKNSTTGKAYSFSTCFAMAIVPEYPKLGGHGLAFTIATTKYLKALPSQYLGLLNSSDVGNFTNHLFAVEFDTVQDFEFGDINDNHVGIDINSMVSNKSAPVAYYADDSTLQNLTLKSGNPILAWVDYDSARSVINITLSPTSTKPKRPILSFNVDLSPILHEYMYVGFSASTGLLASSHYILGWSFKIKNGAASALDLSSLPKLPEPKKKQTSLVTGVTVSVVVFVLSAISIAIYLFRKIKNADVIEDWELEIGPHRYTYQELKRATKGFKDKELLGHGGFGRVYRGTLPYSKTVVAVKRISHDSRQGLREFVAEIASIGRLRHRNLVQLLGWCRRRGDLLLVYDYLANGSLDKYLFDEPKTVLTWKQRFKIVKDVASGLLYLHEGYEQVVLHRDVKASNVLLDSEMNGKLGDFGLARLYEHGANPSTTRVVGTLGYLAPETPRTGKSTTGSDVFSFGAFLLEVVCGRRPIDPKAGQDELVLVDWIWERYKQGMMLDVVDPKLNGQYNESEVLLVLKLGMLCSVTEPSGRPSMRQVVRYLEGEIRLPEDLREAIGCSESITRKGEGFDAFLNSFSSSSSDRMTSFPFTDNNRRLNPNSKVSFPASPLSLLHGETR* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00142 687 FunFam Lectin-domain containing receptor kinase A4.3 327 418 - -
Pte1g00142 687 PANTHER - 41 616 - -
Pte1g00142 687 FunFam L-type lectin-domain containing receptor kinase S.4 22 266 - -
Pte1g00142 687 CDD STKc_IRAK 348 614 - -
Pte1g00142 687 Pfam Legume lectin domain 26 273 IPR001220 GO:0030246
Pte1g00142 687 Gene3D Phosphorylase Kinase; domain 1 327 418 - -
Pte1g00142 687 SUPERFAMILY Concanavalin A-like lectins/glucanases 27 281 IPR013320 -
Pte1g00142 687 Gene3D Transferase(Phosphotransferase) domain 1 419 626 - -
Pte1g00142 687 Pfam Protein kinase domain 342 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g00142 687 CDD lectin_legume_LecRK_Arcelin_ConA 25 260 IPR001220 GO:0030246
Pte1g00142 687 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Pte1g00142 687 Gene3D - 25 261 - -
Pte1g00142 687 FunFam L-type lectin-domain containing receptor kinase S.4 419 625 - -
Pte1g00142 687 ProSitePatterns Protein kinases ATP-binding region signature. 348 371 IPR017441 GO:0005524
Pte1g00142 687 SUPERFAMILY Protein kinase-like (PK-like) 323 617 IPR011009 -
Pte1g00142 687 ProSiteProfiles Protein kinase domain profile. 342 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g00142 687 SMART serkin_6 342 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00142 Pte-Chr1 1476391 1479787 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00142 19 664 Receptor kinase-like Gene Family AT3G55550 57.508 0.0 756
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pte1g00142 Pkinase 1.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00142 - - jre:109006813 966.837