LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte1g00136	ATGAATGATGCAGATGTGTCAAAGCAGATCCAGCAGATGGTCAAATTCATCCGCCAGGAAGCGGAGGAGAAAGCTAATGAAATCTCTGTTTCGGCTGAAGAGGAGTTCAACATTGAAAAGCTGCAATTAGTGGAAGCTGAGAAGAAAAAGATCAGACAAGAATATGAGAGAAAATGCAAGCAAGTTGAAACCCGCAAGAAAATTGAATACTCTATGCAGCTGAATGAATCTCGTATCAAGTATCTTCAAGCACAAGAAGATGTGGTGAGTTCCTTAAAAGAGACAGCTAACAAGGATCTTTTGCGTGTTTCCAATCAGCAGAAATCGTACAAGAAGTTGATCTTAAGCTTAGTTGTTGAGAGCTTACTGCGCTTGAGAGAGCCATCTGTGCTGTTACGATGCAGAGAGATGGATCGTAAGCTGGTTGAGTCAGTACTGGAAGAAGCTAAAAAAGAATGCGCTGAGAAAGTCAAAATGCAAATCACGAAGATTACCATTGATGACCGCGTCTACCTTCCATCCCCACCTAAAAATAAAACTGGTCATGTTGATTCCTATGAAGCTTTCTGCTCTGGAGGAGTAGTCTTAGCTTCAGAAGATGGGAAGATTGTTTGTGAGAATACCCTGGATGCAAGACTCAATATTGCCTTCCGCCAAAAACTCCCGGAGATCCGGAAGCGTATGCTACCTTAA	693	0.4228	MNDADVSKQIQQMVKFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKCKQVETRKKIEYSMQLNESRIKYLQAQEDVVSSLKETANKDLLRVSNQQKSYKKLILSLVVESLLRLREPSVLLRCREMDRKLVESVLEEAKKECAEKVKMQITKITIDDRVYLPSPPKNKTGHVDSYEAFCSGGVVLASEDGKIVCENTLDARLNIAFRQKLPEIRKRMLP*	231

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte1g00136	230	PANTHER	ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED	1	228	IPR002842	GO:0033178\|GO:0046961\|GO:1902600
	Pte1g00136	230	Coils	Coil	38	65	-	-
	Pte1g00136	230	Pfam	ATP synthase (E/31 kDa) subunit	16	227	IPR002842	GO:0033178\|GO:0046961\|GO:1902600
	Pte1g00136	230	Coils	Coil	7	27	-	-
	Pte1g00136	230	SUPERFAMILY	V-type ATPase subunit E-like	87	228	-	-
	Pte1g00136	230	Hamap	V-type proton ATPase subunit E [atpE].	8	230	IPR002842	GO:0033178\|GO:0046961\|GO:1902600
	Pte1g00136	230	Gene3D	-	92	230	IPR038495	-
	Pte1g00136	230	Gene3D	-	1	62	-	-

Showing 1 to 8 of 8 entries

Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte1g00136	Pte-Chr1	1409735	1410963	Dispersed/Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte1g00136	1	229	Primary Pumps ATPases(2)	AT3G08560	69.869	5.68e-114	324

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte1g00136	K02150		-	nnu:104588373	329.717

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