Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00129 ATGGAACAACAAGGAGGATGCTGGATGTGGGAGAAGAGGAAGCACACACTGAGTGCTCTTGGTTCGGCTACCAATGGATCCTATGATGATGACTCATGGGAAGAACAAGCTTTTGCAGAAGACGCAGCTGGAAATCTTGGTGGTTGTACATGGCCACCGAGATTCTATTCTTGCAGCTTTTGCAGGAGAGAATTCCGGTCAGCTCAGGCTCTTGGTGGACATATGAATGTTCACAGAAGGGACAGAGCTAGACTAAAGCAGTCCCCAGGTGATCCCCAAGATGAGATTGCTCATCACGATCTTCCAATTCATCTTCAGAATTCAATCCAAAACCCATTTTCTTCTTTGAGTACTTACCTACGTCCTTCTCAGGTTTGTGGTTTGGATTATAGCATTAACCCTAATTCTGATCCTACCGTTAGATCATCAGCAGCAGAACCTAAAGCAGTTTCAGCTCCACCGACAACTGAAATTTTATCTGAGGATAATCTCTTCCCTCCTTATACTTCTTCAGTATCCAGAGAAAACTATAAGATGTATCCTGTTCATTCTACTAAACCCTGCACACCTATTGTTGAAGAGACAAACTTGGTTTCGCACGACAAGTTCAACCCCAAGAATGATAGTCAGAAGGTCTTAAAGATGATAGATGCTGGGTTTAGAGCAAAGGAGAATTACCTGAGAAATGATTTGGCAGTGAACTTGAACTGGTTTGTCCGTAGAGCTCAACCAACTCTGCTGTCTGAAGCTGAAGAGGAGACGCTCAAATGCAAGAGAAGGAGAATAGAACCGTCAATACCGTTCTTCATCAAGTCAAGCTCAGTTGAAAGACACCATATCTATCCAAAGGTGTTTGAGATGAGCCCTAGTCCCATAGAGGAGCTGGATCTGGAACTAAGGCTTGGGGATAGGCCAAAGGTACAATAG 927 0.4401 MEQQGGCWMWEKRKHTLSALGSATNGSYDDDSWEEQAFAEDAAGNLGGCTWPPRFYSCSFCRREFRSAQALGGHMNVHRRDRARLKQSPGDPQDEIAHHDLPIHLQNSIQNPFSSLSTYLRPSQVCGLDYSINPNSDPTVRSSAAEPKAVSAPPTTEILSEDNLFPPYTSSVSRENYKMYPVHSTKPCTPIVEETNLVSHDKFNPKNDSQKVLKMIDAGFRAKENYLRNDLAVNLNWFVRRAQPTLLSEAEEETLKCKRRRIEPSIPFFIKSSSVERHHIYPKVFEMSPSPIEELDLELRLGDRPKVQ* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00129 308 ProSitePatterns Zinc finger C2H2 type domain signature. 58 78 IPR013087 -
Pte1g00129 308 SUPERFAMILY beta-beta-alpha zinc fingers 53 82 IPR036236 -
Pte1g00129 308 Gene3D Classic Zinc Finger 51 101 - -
Pte1g00129 308 PANTHER OS07G0101800 PROTEIN 27 305 - -
Pte1g00129 308 SMART c2h2final6 56 78 IPR013087 -
Pte1g00129 308 ProSiteProfiles Zinc finger C2H2 type domain profile. 56 83 IPR013087 -
Pte1g00129 308 Pfam C2H2-type zinc finger 56 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00129 Pte-Chr1 1334329 1335255 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00129 5 130 C2H2 Transcription Factor Family AT4G17810 45.312 1.02e-28 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pte1g00129 zf-C2H2_6 1.7e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00129 - - qsa:O6P43_016735 322.398