Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00116 ATGGCTTCGTTTTGTGGCATCAGCTACAGCAACCCTCCAAGTCTCAATTTCCGGTCCCCGTGTTTTACGTCGCGTTTGTCTTACCCATGTTGTTCCACCAATCAGAACAGTAGCCTCATTCAATATCAACGTCGACACTTGTCTCTGTCATTCTTCTTGAATCAGCTTCCTTTTACAACGTCTACATTTATATATAATCCTTATAAGATCTCATTTCCCAGTGCTGCACGCCGTAGCTGTGTTGTTGTGAGGTCTCATATGACTATGGAGGAGAAACCAATTTCAGGAGACAGAATGCTTGTCTTTGTACCTCCACATCCTTTGATCAAGCACTGGGTATCAGTTCTGAGAAATGAACAAACTCCATGTCCTATCTTCAGAAATGCAATGGCTGAGTTGGGAAGGTTACTTATCTATGAAGCTTCAAGAGATTGGTTGCCAACTGTGATGGGAGAGATTCAGTCTCCAATGGGAGTTGCGTCAGTAGAGTTCATTGATCCAAGAGAGCCTGTTATGGTAATTCCAATCCTCAGAGCTGGTCTGGCCCTTGCAGAACATGCATCATCAGTATTGCCTGCTACAAAAACATATCATCTGGGTATGAGCAGAGATGAGGAGACACTTCAACCAAGTGTATATTTGAACAAGTTACCTCAGAAATTTCCTGAAGGTTCTAGGATATTGGTTGTGGATCCTATGCTTGCAACAGGTGGTACAATAGTTGCAGCTCTTACACTCTTGAAAAAACGTGGAGCTGAGAACAAGCAGATTAAAGTGATATCTGCTGTTTCTGCTCCTCCAGCCCTTCAGAAGCTAAGCGAACAGTTCCCTGGACTTCATGTGTACACTGGAATCATTGACCCAACCGTGAATGACAAAGGGTTCATAATTCCTGGACTAGGAGATGCAGGGGACCGCAGCTATGGTACATAG 933 0.4394 MASFCGISYSNPPSLNFRSPCFTSRLSYPCCSTNQNSSLIQYQRRHLSLSFFLNQLPFTTSTFIYNPYKISFPSAARRSCVVVRSHMTMEEKPISGDRMLVFVPPHPLIKHWVSVLRNEQTPCPIFRNAMAELGRLLIYEASRDWLPTVMGEIQSPMGVASVEFIDPREPVMVIPILRAGLALAEHASSVLPATKTYHLGMSRDEETLQPSVYLNKLPQKFPEGSRILVVDPMLATGGTIVAALTLLKKRGAENKQIKVISAVSAPPALQKLSEQFPGLHVYTGIIDPTVNDKGFIIPGLGDAGDRSYGT* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00116 310 NCBIfam uracil phosphoribosyltransferase 104 310 IPR005765 GO:0004845|GO:0006223
Pte1g00116 310 SUPERFAMILY PRTase-like 101 309 IPR029057 -
Pte1g00116 310 Gene3D - 93 310 IPR029057 -
Pte1g00116 310 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 102 287 - -
Pte1g00116 310 Pfam Uracil phosphoribosyltransferase 103 310 - -
Pte1g00116 310 CDD PRTases_typeI 166 286 IPR000836 -
Pte1g00116 310 FunFam Uracil phosphoribosyltransferase 99 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00116 Pte-Chr1 1216654 1221587 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00116 56 310 PRT Gene Family AT3G53900 71.094 1.32e-132 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00116 K00761 - qsa:O6P43_016721 441.039