Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00113 ATGGCTCAGGGGATGGGAAGGAGCAGCAGCGGTGGCAGCAGGGTGGTTGGGGATTACATAGTGGGTCGTCAAATTGGGTCGGGTTCCTTCTCGGTGGTGTGGCATGGAAGGCACCGGGTACACGGGACCGAAGTTGCCATCAAAGAAATCGCCATGGGTAGACTGAACAAGAAGTTGCAGGAGAGTCTTATGTCTGAGATTTTTATCTTGAAGAGGATTAACCATCCGAATATCATTCGCTTGCACGATATAATTGAGGTTCCTGGAAAGATTCATCTAGTATTAGAGTACTGCAGAGGGGGTGATCTGTCTGTCTACATCCAAAGACATCAAAGAGTTCCAGAGGCAATGGCCAGACACTTCATGCAGCAGCTAGCTGCTGGTTTGCAAGTTCTGCGTGACAATAACCTTATTCATCGGGATCTAAAACCACAGAATCTTCTTCTGTCCACAAACGATGAAAGCGCAGTGCTGAAGATTGCAGATTTTGGTTTTGCAAGATCTCTACAACCTAGAGGTCTTGCAGAGACCTTGTGTGGTTCACCACTTTACATGGCTCCAGAGATAATGCAACTTCAGAAATATGATGCCAAGGCAGATCTCTGGAGTGTTGGTGCTATTTTATTCCAACTTGTTACTGGAAGAACCCCATATACTGGAAACAATCAAATTCAGTTACTCCAAAACATTGTGAAATCTAGTGAGCTACGCTTCCCTTCCGGAAGTCAGGATCTGAGTTCTGGATGCAAAGATCTATGTCAGAAGTTGTTGCGCCGGAATCCAGTGGAAAGGTTGACATTTGAAGAATTCTTTAACCATCCATTCCTCATTTCAGAGCAATTACAGCAGGAGGAATCATTGAGGAGTCGAAGGTCCTCAAGGATAGTGGGTTCAATTCCTTTTTCCCAACCTCACTCTGATCCTCTGAGGAATAGGGAAGAAAGCTCTCAAGAAGATTGCTTACCTTTTGCTCTTGATTATGATTCTAGTGGTACTGATGGGAGTCCATCATTTTCTTGGAAGAAATCATTGAAGACATCTGCCTATGGGTTTTCTTTTGATGCGAAACTTCATAGAGCTGACCTGTCACCCTCTTCAAACAACACAAACATTTCTTTCAAACGTGGTAATGCAACACATAGATTTGAACCTTCTGTCATCAGATTGGACAGCGACAGATCCTCGGATGAAAACCATGCGGATCCATTAATTGCTGCTGGGCAAAGATCAGTCAATACTCAGTCAAGAGTTGCTGATTCATTGGAGAATATTGATCAAGATTATGTCCTCGTGTCTGGACCCCCTATGGATATTTCATCTACTTCAGCTAGTGCTACTAAGCCAAGTCAATACAGATCAGAAGGTTTCCCCCAAGATTCTTCTAGTAAAACAATACCAAGTGCTCCAGTGCCTATTAATAGTACAGCTATGAGAAGCAAATACCATGTTGGAAGCTCAGACAGTCATGGCTCCGCTCCAGGGACTTCGCATGACTCACCAGATATGCGAGATACTTTGGAGCAGCCATCAACTGATTGCATGACGAGGATTAAATCGTTGCAGGAGTGTGCATCAGTGATTACAGAATTAGTTAATGAGAAGATTGAAGGAGGAAGGGACTTGGAAGCGTTTTCTATTCAGCTTGTAATTCTTGCAATTTGGAAGCAAGCTCTTCACATTTGCCATACACAAGCTGCCTCAGCTACAGAAGGAAGTCCAATTCAAGATAAGAGATGTAGAAAAAGTAATGGTTCCGAAAGTCTTGACATCGAGAACAGTGAAGGGCCTGCGAGTATTATGTCTCAAATTGAAAGGGATTTTCTTGCACAAGTTGAGCATGCCGAAAAACTTGCAAAGGCCATTGAGCCTGGAAATACAGAGATGCCTGACGCATTGGAAACAATATTTCAATCTGCTCTTGATTTCGGGAGACATGGGGGTGTAAGTATTTCTTACTCGTTTTCCCTTGATGTTTTGATAGACATGCGCCCTATACCAGTTGTCATGAGTTTCTTTAATCCTTTTCAAATGGAATAA 2037 0.433 MAQGMGRSSSGGSRVVGDYIVGRQIGSGSFSVVWHGRHRVHGTEVAIKEIAMGRLNKKLQESLMSEIFILKRINHPNIIRLHDIIEVPGKIHLVLEYCRGGDLSVYIQRHQRVPEAMARHFMQQLAAGLQVLRDNNLIHRDLKPQNLLLSTNDESAVLKIADFGFARSLQPRGLAETLCGSPLYMAPEIMQLQKYDAKADLWSVGAILFQLVTGRTPYTGNNQIQLLQNIVKSSELRFPSGSQDLSSGCKDLCQKLLRRNPVERLTFEEFFNHPFLISEQLQQEESLRSRRSSRIVGSIPFSQPHSDPLRNREESSQEDCLPFALDYDSSGTDGSPSFSWKKSLKTSAYGFSFDAKLHRADLSPSSNNTNISFKRGNATHRFEPSVIRLDSDRSSDENHADPLIAAGQRSVNTQSRVADSLENIDQDYVLVSGPPMDISSTSASATKPSQYRSEGFPQDSSSKTIPSAPVPINSTAMRSKYHVGSSDSHGSAPGTSHDSPDMRDTLEQPSTDCMTRIKSLQECASVITELVNEKIEGGRDLEAFSIQLVILAIWKQALHICHTQAASATEGSPIQDKRCRKSNGSESLDIENSEGPASIMSQIERDFLAQVEHAEKLAKAIEPGNTEMPDALETIFQSALDFGRHGGVSISYSFSLDVLIDMRPIPVVMSFFNPFQME* 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00113 678 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 5 641 IPR045269 GO:0004674|GO:0006914
Pte1g00113 678 Pfam Protein kinase domain 20 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g00113 678 SMART serkin_6 19 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g00113 678 ProSitePatterns Serine/Threonine protein kinases active-site signature. 137 149 IPR008271 GO:0004672|GO:0006468
Pte1g00113 678 MobiDBLite consensus disorder prediction 432 508 - -
Pte1g00113 678 Gene3D Transferase(Phosphotransferase) domain 1 11 318 - -
Pte1g00113 678 MobiDBLite consensus disorder prediction 389 414 - -
Pte1g00113 678 ProSiteProfiles Protein kinase domain profile. 19 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g00113 678 FunFam Serine/threonine-protein kinase ATG1 11 319 - -
Pte1g00113 678 FunFam Aurora kinase A 13 101 - -
Pte1g00113 678 ProSitePatterns Protein kinases ATP-binding region signature. 25 48 IPR017441 GO:0005524
Pte1g00113 678 MobiDBLite consensus disorder prediction 435 495 - -
Pte1g00113 678 SUPERFAMILY Protein kinase-like (PK-like) 15 277 IPR011009 -
Pte1g00113 678 MobiDBLite consensus disorder prediction 572 592 - -
Pte1g00113 678 CDD STKc_ATG1_ULK_like 25 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00113 Pte-Chr1 1193162 1202086 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00113 15 283 CBL-interacting serine-threonine protein kinases AT2G30360 36.727 3.96e-55 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Pte1g00113 Pkinase 1.9e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00113 K08269 - zju:107430659 863.988