Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00102 ATGTTAGCTGCTAAGCTCACATCCAACCATGGCTTTGGAACTGAGCCTATCTCGCCTTCCAACACCACGGTGGCGCATTCGAGTCGTCGGAATATCCCGATACACACAACATTTTATTGGGGTCACAACACGGAGGTACTATTTTCTTGTTGGCCCGGTGGGAGCTCAGCCATGTACGCTTTAGCTTTGGTCTTTGTTTTCACTCTGGCTTTTGCAGTGGAGTGGCTGTACTTCACCGAATTCTTCAAGCCTGGAGGAAACGCCGTTGTTAAAGGTGCACTGAAAACGACACTGCATGGAGTGAGGTCTGCTTTGTCGTATATGGTGATGCTAGCGGTGATGTCGTTTAACGGTGGCGTGTTTATTGCTGCGGTTAGTGGACACGCTATCGGGTTCTTAGTTTTTCGGACTCGGGCAATTCTTAAATCGGGTGATCCGGATTCTGCAAAGCCCAATGATGTCAGAGAGATTTTGTAA 477 0.4843 MLAAKLTSNHGFGTEPISPSNTTVAHSSRRNIPIHTTFYWGHNTEVLFSCWPGGSSAMYALALVFVFTLAFAVEWLYFTEFFKPGGNAVVKGALKTTLHGVRSALSYMVMLAVMSFNGGVFIAAVSGHAIGFLVFRTRAILKSGDPDSAKPNDVREIL* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00102 158 Coils Coil 158 158 - -
Pte1g00102 158 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 28 139 IPR007274 GO:0005375|GO:0016020|GO:0035434
Pte1g00102 158 Pfam Ctr copper transporter family 93 135 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00102 Pte-Chr1 1115841 1116549 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00102 37 145 Inorganic Solute Cotransporters AT5G59030 49.107 6.86e-32 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00102 K14686 - gmx:100803410 173.711