Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00086 ATGAAGAATCATGAACACTTTCTAATACCAGTGAGTTGTGATGAACGTATCCAGAAGATTCAAACAATAAAAATTATGGAGGGTATACTTATTTGTGCTGCCCCTCATTGTCTTAAATCTTTCCTAAAACGGGCTGATTTTGAATCTCATATCCAAGACAGCCATGCTAATCTCCTTCACCCCAATGTGGAGAAAGAAGATGGAAATGATTCAGAAGCACTGAGTGTGAGACAGTCTACAGCTTCAGAATCCACTGTCCGAGGTCCCCAGAAGCAGGTTTTTTCTCCTGGTCCAAATAGCTATGATCGGGATGACAAATTGCATCATCAGCAATCTAGAGAGCAACCTCCTCTAAGAGCATCCATACAACCAAGGCCTCAGATATCAGGGCAAATCCTAAATCACCAATCGGATCTCCAAGCTGGACCCTTGACAGGAAACCAACATGGCTTTCATCAACAAAACTTTGACATGCAGGGTACTCCTCAACATCCCAATCAATTTCCAGACAGGCAGCAAGGAGTGGTGCCTGCGACACAGTTCCCTGAATATCCACCCATGCATTCTATACAACCATCTAACTATGCTGTACCTTTCAATGCAAACACGATGATGAACCCTCCTCTGCCATTTGGTTACCCTCCCTATCCTCCTGAAGGTGCTCAACCATATTTTGCTCCTCAGTTTGAGATGGCTCGACAAGACTCAGGTTCTGAAATAGTTACAGAACAGGGGCCACCGTTTGGTTTCCCACCAGGTTATGCTCCACGGCAGCAGTGGAATGCTGGAATGGCAGGTGTGCCTTTCGAGCAAATGATAGGTGATCAATCCCGAAGTGCCAGTGCCAGTGCCATGGATCTGCGTGATGCCAAAGGTATATTGGCACAGCAACCATTTCCACTCCCTCCTCCACCCCCTCCTCCGCACCACAAGTTTTACTACGGTGATCTTCCACATGATTGA 963 0.4621 MKNHEHFLIPVSCDERIQKIQTIKIMEGILICAAPHCLKSFLKRADFESHIQDSHANLLHPNVEKEDGNDSEALSVRQSTASESTVRGPQKQVFSPGPNSYDRDDKLHHQQSREQPPLRASIQPRPQISGQILNHQSDLQAGPLTGNQHGFHQQNFDMQGTPQHPNQFPDRQQGVVPATQFPEYPPMHSIQPSNYAVPFNANTMMNPPLPFGYPPYPPEGAQPYFAPQFEMARQDSGSEIVTEQGPPFGFPPGYAPRQQWNAGMAGVPFEQMIGDQSRSASASAMDLRDAKGILAQQPFPLPPPPPPPHHKFYYGDLPHD* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00086 320 PANTHER E3 UBIQUITIN-PROTEIN LIGASE HAKAI-RELATED 13 309 IPR040383 GO:0016567|GO:0061630
Pte1g00086 320 MobiDBLite consensus disorder prediction 59 121 - -
Pte1g00086 320 MobiDBLite consensus disorder prediction 297 312 - -
Pte1g00086 320 MobiDBLite consensus disorder prediction 274 320 - -
Pte1g00086 320 ProSitePatterns Zinc finger C2H2 type domain signature. 32 55 IPR013087 -
Pte1g00086 320 MobiDBLite consensus disorder prediction 73 97 - -
Pte1g00086 320 MobiDBLite consensus disorder prediction 138 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00086 Pte-Chr1 996916 999748 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00086 9 265 C2H2 Transcription Factor Family AT5G01160 39.855 8.65e-41 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00086 K15685 - gmx:100803063 338.576