Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00076 ATGATTCCAAGGAAGACTGTAGGTGATGTGATCAGACAATACAAGGAGTTAGAAGAAGATGTCAGTGACATTGAATCTGGGCTCATACCTATTCCTGGTTATGCCAGTAGCTCTTTCACGTTGGAGTGGTTCAACAATCAAGGCTTTAATGGGCTAAAGCAATTATACGGTGGCGGCGGTAAAAGGGGATCTTCCACAAGGCCTTTTGAGCAAGAAAGGAAAAAGGGAGTGCCATGGACAAAAGAGGAGCACAGGCAATTCTTGATGGGGCTTAAAAAGTATGGCAAAGGTGACTGGAGAAATATCTCTCGGAACTTTGTGACTACGAGGACCCTTACTCAGGTCGCTAGTCATGCGCAGAAATATTTCATCCGGCAGCTTATAGGAGGGAAGGATAAGCGAAGATCAAGCATCCATGATATCACAACCGTCAACCTCCCAGACACCAAGTCTCCTTCACCCGACTCTCAGAAGCTGACATCTCAAGATCATTCTCTGAAGATTTTGCATACACAGCAAAATCAAAAGGTTTCTGCCAATTGGCAATTACCATGCGAGGAAGCAGCTATGCCTTATAGTCCAACGAATGGAAATATGTTTATTGCACCATTTTACGGGGTCTCCTCAAATGAATCTAGGTTACAAGATCAATATTTTTTCAGGGGCACTCTTCATGGATCTCAGTGTGGAGCTTATGATACCAGCTTCTAA 711 0.4388 MIPRKTVGDVIRQYKELEEDVSDIESGLIPIPGYASSSFTLEWFNNQGFNGLKQLYGGGGKRGSSTRPFEQERKKGVPWTKEEHRQFLMGLKKYGKGDWRNISRNFVTTRTLTQVASHAQKYFIRQLIGGKDKRRSSIHDITTVNLPDTKSPSPDSQKLTSQDHSLKILHTQQNQKVSANWQLPCEEAAMPYSPTNGNMFIAPFYGVSSNESRLQDQYFFRGTLHGSQCGAYDTSF* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00076 236 NCBIfam myb-like DNA-binding domain, SHAQKYF class 74 126 IPR006447 GO:0003677
Pte1g00076 236 CDD SANT 78 123 IPR001005 -
Pte1g00076 236 SMART sant 75 125 IPR001005 -
Pte1g00076 236 MobiDBLite consensus disorder prediction 59 78 - -
Pte1g00076 236 SUPERFAMILY Homeodomain-like 72 126 IPR009057 -
Pte1g00076 236 ProSiteProfiles SANT domain profile. 79 127 IPR017884 -
Pte1g00076 236 ProSiteProfiles Myb-like domain profile. 71 123 IPR001005 -
Pte1g00076 236 FunFam transcription factor MYB1R1 77 128 - -
Pte1g00076 236 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 181 IPR043363 -
Pte1g00076 236 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 71 127 IPR017930 -
Pte1g00076 236 Pfam Myb-like DNA-binding domain 78 123 IPR001005 -
Pte1g00076 236 Gene3D - 77 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00076 Pte-Chr1 915340 917055 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pte1g00076 Myb_DNA-binding 2e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00076 - - qsa:O6P43_026398 363.229