Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00058 ATGAAGGAGTCTGATAAAGTACAAATTCATCCACCGGAGATCATTGTTGACAAGCATGTCTATCTTCCACCTGAACATCACTTTTTCGACCTTTTCTATCATCACCATGAGAGTGGTCCATTCTGCTCTGGGAGTGTAGTTTTAGCATCTAAATATGGGAAGATTGTTTTTGAGAACACCCTGAATGCACGGCTGGATGTTGTATTCCGTAAAAAGCTTCCAGAGTTGCTTCGAATTCTTGATGAGAAAGTTGAGCCACAGGAGAAAGATTTGCCAAAGTGA 282 0.4113 MKESDKVQIHPPEIIVDKHVYLPPEHHFFDLFYHHHESGPFCSGSVVLASKYGKIVFENTLNARLDVVFRKKLPELLRILDEKVEPQEKDLPK* 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00058 93 SUPERFAMILY V-type ATPase subunit E-like 35 80 - -
Pte1g00058 93 Pfam ATP synthase (E/31 kDa) subunit 8 77 IPR002842 GO:0033178|GO:0046961|GO:1902600
Pte1g00058 93 Gene3D - 1 85 IPR038495 -
Pte1g00058 93 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 4 80 IPR002842 GO:0033178|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00058 Pte-Chr1 694323 695518 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00058 4 74 Primary Pumps ATPases(2) AT4G11150 52.113 4.41e-17 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00058 K02150 - cpap:110809449 102.449