Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00048 ATGGCGCTCCAATCGACCCATCTCTACCAACTATCAACAAGAACGCCAATACTCCGAGTCCAAGCAGCAACCGGAACCTTCAATGCTCGCCAACTAATAGAGTCTGGCACTGTCAGAATTTTGCAGCCAAAAGATGCATCCATGGCCATCCGTTGTGAAGGATTTGTGCTCCTGGATGTCAGGCCAGAATGGGAAAGGAAGAAGGCTTATGTTAAGGGATCACTGCACGTTCCACTCTTTGTGGAAGACGTAGATAACAGCCTCCTAACTCTGATTAAGAAATGGGTGCACTTCGGATACATTGGACTGTGGACTGGTCAATACTTCACCACTCTTAATCCTAGTTTTCTTAGTCAACTGGAGATGACTGTTCCCAGCAAAGATAGCAAGCTTCTGGTGTCTTGTGGTGAAGGCTTGAGATCCCTGATGGCAATCCCAAAAGTGTATGAAGGAGGCTACAGAAATCTGGCCTGGCTAGCAGGAGGGTTCAATCGTTCAGCAGATGATGATTTCCCTTCAGTTGAAGGTGAAGAGAAGCTCCAATATGCAACAGTAGGAGGTGTCTCGTACTACTTCCTTAAGTTGCTCATCCTCCTTCAAGCTGTAGGAAAAGGATGA 618 0.4676 MALQSTHLYQLSTRTPILRVQAATGTFNARQLIESGTVRILQPKDASMAIRCEGFVLLDVRPEWERKKAYVKGSLHVPLFVEDVDNSLLTLIKKWVHFGYIGLWTGQYFTTLNPSFLSQLEMTVPSKDSKLLVSCGEGLRSLMAIPKVYEGGYRNLAWLAGGFNRSADDDFPSVEGEEKLQYATVGGVSYYFLKLLILLQAVGKG* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00048 205 Gene3D - 39 184 IPR036873 -
Pte1g00048 205 CDD RHOD 45 164 - -
Pte1g00048 205 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 10 18 204 IPR044614 -
Pte1g00048 205 SMART rhod_4 41 172 IPR001763 -
Pte1g00048 205 FunFam Rhodanese-like domain-containing protein 10 38 182 - -
Pte1g00048 205 ProSiteProfiles Rhodanese domain profile. 51 175 IPR001763 -
Pte1g00048 205 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 29 176 IPR036873 -
Pte1g00048 205 Pfam Rhodanese-like domain 46 164 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00048 Pte-Chr1 615483 616295 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00048 4 191 Sulfurtransferasese or Rhodanese AT3G08920 53.030 3.42e-73 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00048 - - qsa:O6P43_026227 310.842