Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00045 ATGGAGGGACATGGAAGACTTCCTCATCATCAACAATTTCAGCAATATCAACATAGCACAAGTATCAACGTCGATACTAGTGATAGGTTTCCCCAGTGGAATATTCAAGAAACGAAGGAGTTCTTGGTCATCAGAGCAGAGCTGGATCAAACTTTCATGGAGACAAAACGAAACAAGCTTCTCTGGGAAGTCATAGCCACAAAAATGAAGGAAAAAGGTTACAATCGAAGTGCAGAACAGTGCAAGTGCAAGTGGAAAAACCTCGTTACACGCTACAAGGGGTGTGAAACGATGGAGACAGAAGCCATGAGACTGCAATTCCCTTTTTACAACGAGCTACAAGCGATTTTTGCTGGTAGGATACAAAGAATGCTGTGGGCGGAAGCAGGAGGTGGAGCCAGCGGGTCAAAGAAGAAGGCATCAGTGCAGTTGTCGTCTGAAGAAGAAGACTATAATGAAGATAGCGAAGGAGAGAAAGGTAGTAGCATCAGTAGGAAGAAGAAGAAAAAGAGCAAGATTAATAGTAGTAGCAATGTTGGTAGTGGAAGTGGAAGTGGAAGTAATAATTTGAAGGAGATATTGGAAGAGTTCATGAAGCAACAAATGGAAATGGAAGCAAAGTGGATGGAAGCTTTGGAATCAAGAGAGAATGAGAGGAGGATGAAGGAGATGCAGTGGAGGCAGACAATGGAGGCGTTAGAGAATGAGAGGATGATGATGGAACAGAGATGGAGGGAGAGAGAAGAGCAAAGAAGAATGAGAGAAGAAGCTAGGGCTGAGAAGAGAGATGCTCTAATCACAGCTCTGTTGAACAAGCTCAGAAGAGGTGACATGTAG 837 0.4361 MEGHGRLPHHQQFQQYQHSTSINVDTSDRFPQWNIQETKEFLVIRAELDQTFMETKRNKLLWEVIATKMKEKGYNRSAEQCKCKWKNLVTRYKGCETMETEAMRLQFPFYNELQAIFAGRIQRMLWAEAGGGASGSKKKASVQLSSEEEDYNEDSEGEKGSSISRKKKKKSKINSSSNVGSGSGSGSNNLKEILEEFMKQQMEMEAKWMEALESRENERRMKEMQWRQTMEALENERMMMEQRWREREEQRRMREEARAEKRDALITALLNKLRRGDM* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00045 278 MobiDBLite consensus disorder prediction 174 188 - -
Pte1g00045 278 PANTHER FI21293P1 15 274 - -
Pte1g00045 278 FunFam Zinc finger and SCAN domain-containing 20 33 94 - -
Pte1g00045 278 Pfam Myb/SANT-like DNA-binding domain 32 116 IPR044822 -
Pte1g00045 278 Coils Coil 223 267 - -
Pte1g00045 278 MobiDBLite consensus disorder prediction 131 188 - -
Pte1g00045 278 CDD GT1 31 96 - -
Pte1g00045 278 Gene3D - 33 94 - -
Pte1g00045 278 ProSiteProfiles Myb-like domain profile. 33 89 IPR001005 -
Pte1g00045 278 Coils Coil 187 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00045 Pte-Chr1 603226 604525 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00045 28 275 Trihelix Transcription Factor Family AT5G01380 54.135 1.05e-74 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pte1g00045 Myb_DNA-bind_4 1.3e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00045 - - qsu:112009211 345.895