Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00034 ATGGAACGAAGCCATGGCTCAGAATATTCAAAAATAAACCTAGCAGACCAAGTTGAAGACAGGGTTGAAACTAGTGCTGAAGGAAATGAAGATGAAAGTAAGCCAACTAATGGAGGAAGCTCCAGCAATAGCACTGTGGAAGATAATGAGAAAAAGCCATCGGTAAGACCCTATGTTAGATCCAAGTTGCCAAGGTTAAGGTGGACACCGGATCTTCATCACAGATTTGTTCTTGCTGTTGAAAGACTTGGGGGACAAGATAGGGCAACGCCAAAGTTGGTTCTTCAATTGATGAATATCAAAGGGCTGAGTATTGCTCATGTCAAGAGCCATTTACAGATGTATAGAAGCAAAAAGACCGATGACCCAGATCAAGTTCATAGGCATCTTGTGGAAAGCGCAGATCATAATGTTTATAACCTCAGCCAGCTTCCTGTCATCCAAGGCTACAACCAAATGCATTCAAACTTCAGATATGCAGATATTTCATGGGGTGGTTGTGATAAAGTGATGCACAGAGCCCTTGTAGGTCGGAATTCAATGGGAGAATCACAAGCTGGATTATATGGAAGTATGTTTGGGCAAAAAAAATTCGGTTGGAGTAATAGTAATGCCCCTGCGGCTAGTTGCTCTATTAATGGACATTCAACCAGATCAAGAACGCAAGGATCAAAGGATGGATTCTTATCATTTGATACGCCTACAAGGCCACTGCTCACACAAGAGCTTCCATGTTTCAGAGATACAACTTTTTCAGATACCAACTCAGGAACTGGTCTGCAAGATCAGACGGTTTTGAAAAGGAAGGCTTCAATTAATTGTGAACTCGATTTGAATCTTTCACTTGGACTAAATAGGCGTGATGATGTTGGAAGTGGCAACAATTTGGAAGACAACAAACTAGATAGTAACCTGTCCTTATCGCTGTACTCCTCAACTTCAAATGGTAGTATCTGCAGATCAAAGGAAGTACAAGAAAACAATAAGGAGTATGAAGGAAAAGCGAGTACTTTGGATCTGACTATATGA 1029 0.4111 MERSHGSEYSKINLADQVEDRVETSAEGNEDESKPTNGGSSSNSTVEDNEKKPSVRPYVRSKLPRLRWTPDLHHRFVLAVERLGGQDRATPKLVLQLMNIKGLSIAHVKSHLQMYRSKKTDDPDQVHRHLVESADHNVYNLSQLPVIQGYNQMHSNFRYADISWGGCDKVMHRALVGRNSMGESQAGLYGSMFGQKKFGWSNSNAPAASCSINGHSTRSRTQGSKDGFLSFDTPTRPLLTQELPCFRDTTFSDTNSGTGLQDQTVLKRKASINCELDLNLSLGLNRRDDVGSGNNLEDNKLDSNLSLSLYSSTSNGSICRSKEVQENNKEYEGKASTLDLTI* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00034 342 MobiDBLite consensus disorder prediction 1 58 - -
Pte1g00034 342 NCBIfam myb-like DNA-binding domain, SHAQKYF class 64 119 IPR006447 GO:0003677
Pte1g00034 342 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 60 120 IPR017930 -
Pte1g00034 342 FunFam Myb family transcription factor 62 120 - -
Pte1g00034 342 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 41 149 IPR046955 GO:0003700
Pte1g00034 342 Gene3D - 63 120 - -
Pte1g00034 342 Pfam Myb-like DNA-binding domain 66 116 IPR001005 -
Pte1g00034 342 SUPERFAMILY Homeodomain-like 63 119 IPR009057 -
Pte1g00034 342 MobiDBLite consensus disorder prediction 1 30 - -
Pte1g00034 342 MobiDBLite consensus disorder prediction 31 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00034 Pte-Chr1 490311 491771 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00034 55 121 G2-like Transcription Factor Family AT2G42660 79.104 1.61e-31 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pte1g00034 Myb_DNA-binding 2.6e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00034 - - tcc:18597485 289.271