Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00022 ATGAATAGAAAGATACTGTATTTCTTCGTGGCTGATATATATACTACTTCGTTATTCATTCTACAGCGTCAGCAACCAGCAACGAAACAAGAAACATGGAAATTCAGTGAACAGATAAAGCAAGCAGAACTTGGTGAACAAATTCTAGAAACCAAATCACACAATCTACCATATGAAACCTCCTGCGCGCAATCTAACATGGAAAACAATCCAGCTACTCAGTCTGGTTTTGGCTTTAATCAATCCGCTCATTCAATCAGAGAGCGAAAAATGTCAGAAGATGGCTTCAAATGGAAAAAATATGGTCAGAAACAAGTTAAAGGAAGCGAAAATCCCCGAAGCTATTACAAATGCACATATCCAGGTTGTGCAATGAAAAAGAAAGTGGAGACTTCTTTAGAGGGGCATGTAACTGAAATTGTCTACAAGGGAAGCCACAATCACCCAAAGCCTCAGCCAAACAGACGCACAAGTTTTCACCCTTCATCATCATGTACCAGCTCTGGTGTTTCCGACCAATCAGTTGTGACTCTAGGGAACATTAAAATGGAAGTCACGTTGCAAGAAGATTCTTCGGTATCACTTGGCGAAGAAGAACAAAAATCACTAACCAGTAATTCAGTAGATTATGATGATGAATTTGAACCTGATGCCAAAAGATGGAAAGTAGAAGATGAAAATGGAGGTTATTCAACTGCAGGAAGTAGTACAGTGAGGGAACCTAGAGTTGTTGTTCAAACTACAAGTGAAATCGATATACTCGACGATGGGTACAGATGGAGGAAATATGGGCAGAAAGTTGTCAAAGGCAATCCAAACCCAAGGAGTTACTACAAGTGCACATTTGCAGGCTGTTCAGTGAGGAAACATGTGGAGCGAGCCGCCAATGATTTGAGGTCTGTGATCACAAGTTATGAAGGGAAACACAACCATGACGTCCCTACTGCACGAGGAACCGGTACTTATGCTACAAACAGAACTTCATTCAATAATAACCTTGGCAACGCAATCGTGCCAATAAGGCCGTCAGCCATGACCAGTTACTCTAGTCAACCAATTTTTATAAATTCTGTCAACCACACAAGGCTACCAAATTCTTCAAGTCAAGAACCAGCTCACTTTGAAATGTTGGAGGATCCTGGGAACATTGGATATTCAAATTTTGGAAGGTTGATCGATTCATACCTAGACCAACACAAAGATTACGGTGGACATTTGCCAAGTTCATGA 1230 0.4081 MNRKILYFFVADIYTTSLFILQRQQPATKQETWKFSEQIKQAELGEQILETKSHNLPYETSCAQSNMENNPATQSGFGFNQSAHSIRERKMSEDGFKWKKYGQKQVKGSENPRSYYKCTYPGCAMKKKVETSLEGHVTEIVYKGSHNHPKPQPNRRTSFHPSSSCTSSGVSDQSVVTLGNIKMEVTLQEDSSVSLGEEEQKSLTSNSVDYDDEFEPDAKRWKVEDENGGYSTAGSSTVREPRVVVQTTSEIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTFAGCSVRKHVERAANDLRSVITSYEGKHNHDVPTARGTGTYATNRTSFNNNLGNAIVPIRPSAMTSYSSQPIFINSVNHTRLPNSSSQEPAHFEMLEDPGNIGYSNFGRLIDSYLDQHKDYGGHLPSS* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00022 409 Gene3D WRKY domain 239 315 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte1g00022 409 Gene3D WRKY domain 79 152 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte1g00022 409 ProSiteProfiles WRKY domain profile. 249 314 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte1g00022 409 MobiDBLite consensus disorder prediction 189 203 - -
Pte1g00022 409 MobiDBLite consensus disorder prediction 151 171 - -
Pte1g00022 409 FunFam WRKY transcription factor 80 152 - -
Pte1g00022 409 FunFam WRKY transcription factor 33 241 307 - -
Pte1g00022 409 Pfam WRKY DNA -binding domain 93 149 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte1g00022 409 Pfam WRKY DNA -binding domain 255 312 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte1g00022 409 ProSiteProfiles WRKY domain profile. 87 151 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte1g00022 409 MobiDBLite consensus disorder prediction 189 211 - -
Pte1g00022 409 MobiDBLite consensus disorder prediction 143 171 - -
Pte1g00022 409 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 43 348 IPR044810 GO:0003700
Pte1g00022 409 SUPERFAMILY WRKY DNA-binding domain 87 151 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte1g00022 409 SUPERFAMILY WRKY DNA-binding domain 246 314 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte1g00022 409 SMART WRKY_cls 92 150 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte1g00022 409 SMART WRKY_cls 254 313 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00022 Pte-Chr1 385352 386834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00022 87 386 WRKY Transcription Factor Family AT2G38470 54.381 2.21e-100 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte1g00022 WRKY 2.5e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00022 K13424 - gmx:100792833 434.876