Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00005 ATGGGCAGGTACAGGTTCAAGCTATCGGACAGAATCCTCCGTGCTTGGTTTTACAAACTCACGGACATGAGTAGCAAAGGGAGAAGCAATCCCATTTCTACCACTGCCAACAACATTCATTCCAGGAAGCAAAAACAAGCACATGTATCCGCTTCAACAACTGCACACCCATCCAAACCGAGACAACCCCACCCATCCAATCCCAGAAAATCTTACTACTTCACAAGGGATGTTGCTTCAAGAGTTGAATTCTCAGACTTCCAGGTTGCTTTTGAGACGCCTAGAAAGTCGTCCAAACAGAAGTCAAGAAGGAGAACAAGTGTCAGGTCTTCTTCTCCAAAGCTTGTTAGCTCGTGTGTTTCTTCTGGATATAGTGGTAGGACTAAACTTGAATCTAACTGGACGAAATCTGATTTTCCCTCCGAGTACTCTTCTTCACCAGACCCCGAAGCTACTGACACAGAAATCAGAACGGATCGTCTTCTTCCAACTGAATCATTGGACGAACTTCATTCCAGCTCTAGCTCTAGTGGCTATAGAGTCAATTCCAGTGCCAATGATATTTTCATTCATGTAGATAACAATTCTCTTGCTGTCAAGTGTGACAACAAGCTTGATTATCATGATACATTGCCAGAGCTAGAAGTTGAACTGCCTCCAATCATAACCAAACCTGCCAGTGCTAAGTTCAGCGATATGGCGAGTGATGTCAAGAAGAAGGAGACAGGTGATCATAAAACCTACAACAGAAGCAGATCAGTTGAGTACAAAGAACCCAAAAAACAGGGTCCCCTGAGAGTTAAGATTGTGAAACAAGACATCACGTCAACCCATGAACAGAGAACCGGCCCTGTCAGGAAATTTTCGGTGAGCTCTCCAGGGCCAGGGGTAAGGCTTAGAAGTCATTATCCAAAGATAGCAAGCAGGAAAAATCAAGCGCAGAGCAGGAACAGTGCGCCATCCATTGGTGGTATCCACTCCAATACTAGGAGAAACAGAAGCCTTTCAGAGAGCTTTGCAGTGGTGAAGTCATCGTTCGATCCTCAGAGAGACTTCAGGGACTCCATGGCGGAGATGATTTTGGAGAATAACATCAGGGAATCCAAGGATTTGGAGGATCTTCTTGCATGCTACCTTTCACTTAATTCAGACGAATATCATGACCTCATTATCAAGGTGTTCAAGCAGTTATGGTTTGATTTGATTGACACCAGGTAG 1218 0.445 MGRYRFKLSDRILRAWFYKLTDMSSKGRSNPISTTANNIHSRKQKQAHVSASTTAHPSKPRQPHPSNPRKSYYFTRDVASRVEFSDFQVAFETPRKSSKQKSRRRTSVRSSSPKLVSSCVSSGYSGRTKLESNWTKSDFPSEYSSSPDPEATDTEIRTDRLLPTESLDELHSSSSSSGYRVNSSANDIFIHVDNNSLAVKCDNKLDYHDTLPELEVELPPIITKPASAKFSDMASDVKKKETGDHKTYNRSRSVEYKEPKKQGPLRVKIVKQDITSTHEQRTGPVRKFSVSSPGPGVRLRSHYPKIASRKNQAQSRNSAPSIGGIHSNTRRNRSLSESFAVVKSSFDPQRDFRDSMAEMILENNIRESKDLEDLLACYLSLNSDEYHDLIIKVFKQLWFDLIDTR* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00005 405 MobiDBLite consensus disorder prediction 152 166 - -
Pte1g00005 405 MobiDBLite consensus disorder prediction 109 151 - -
Pte1g00005 405 NCBIfam uncharacterized plant-specific domain TIGR01568 339 402 IPR006458 -
Pte1g00005 405 MobiDBLite consensus disorder prediction 91 180 - -
Pte1g00005 405 Pfam Transcriptional repressor, ovate 345 401 IPR006458 -
Pte1g00005 405 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 66 402 IPR038933 GO:0045892
Pte1g00005 405 MobiDBLite consensus disorder prediction 233 261 - -
Pte1g00005 405 MobiDBLite consensus disorder prediction 24 71 - -
Pte1g00005 405 Pfam DNA-binding domain 1 46 IPR025830 GO:0003677
Pte1g00005 405 MobiDBLite consensus disorder prediction 307 330 - -
Pte1g00005 405 ProSiteProfiles OVATE domain profile. 341 400 IPR006458 -
Pte1g00005 405 MobiDBLite consensus disorder prediction 24 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00005 Pte-Chr1 262057 264339 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Pte1g00005 Ovate 2.7e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00005 - - tcc:18602241 340.117