Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g01217 ATGGAAATGGTGGATGAAGCGATTCAGAAGTTCATTCTTAGGAAATTAGAAGAATCTGACTTAAATATAATTACTATGCGTCAGTTGAAGGAGATGGTCTCTCAAGAATTAGGAATTGATTTTTCTCAACCTCATTACTCGATTCTTATCGAGAAGACCGTAGAAATTTTCATGCAACGTAAGCGAGAAGAACCGCATGATGATCATCTTATCATTTGCAAGTACAGAAAGCATATATCGGTGTCTATTCGTGAGTTTTATAAGAATGATGGAAAGGAGTTTCCTAGTAAAAAAGGAATCAGTTTGACTCTTGGGCAATGGTCGATTTTGAAGAAAAACATATCTGCAGTAGATGAAGCAATTGCAAAGATGAAATCCGGTGTTTGA 387 0.3592 MEMVDEAIQKFILRKLEESDLNIITMRQLKEMVSQELGIDFSQPHYSILIEKTVEIFMQRKREEPHDDHLIICKYRKHISVSIREFYKNDGKEFPSKKGISLTLGQWSILKKNISAVDEAIAKMKSGV* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g01217 128 Gene3D Transcriptional Coactivator Pc4; Chain A 68 128 IPR009044 GO:0003677|GO:0006355
Pte19g01217 128 SUPERFAMILY ssDNA-binding transcriptional regulator domain 70 123 IPR009044 GO:0003677|GO:0006355
Pte19g01217 128 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 74 126 IPR045125 GO:0003713|GO:0060261
Pte19g01217 128 Pfam Transcriptional Coactivator p15 (PC4) 74 113 IPR003173 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g01217 Pte-Chr19 22894755 22895587 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Pte19g01217 DEK_C 9.8e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g01217 K25815 - gmx:100305633 100.523