Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g01213 ATGTCGGTGCAGACTACTGTTAAACTCTCGGAGCTTGTCATCGTCAAGCAGCAACAGTCTCTGATACCTTCAACTGAAATGGAGACAGAGTATACCCCAGTAGTATGCTCACCAAAGAGGAAAGGTCAGCTTAAGCTTGTGAGAATCGTAGTCACTGATGCTGATGCAACTGATTCCTCAAGTGATGAGAACGAAGAACTCAAAAGGCCTATACGAAGAAGCAAGAGACATGTGAAAGAAATCAGCTTGGAGCTTCCTTCAACAGACTCTGCTACTCCTTCTTTCACTTCTTCCTCAACTTTGTCATCTAATTCATCAGTTCAGAACCAACAGAAAAAGCAGAGAACTCCGGTGAGGGTTAGCAGAAGAATAGCCTCTCGGTGTCACAAATTCCGAGGGGTCCGGCAAAGACCGTGGGGAAGATGGGCTGCAGAGATCCGAGACCCCATTAGACGGAAGCGGGTTTGGCTTGGAACATTCGATACGGCAGAGGAAGCTGCCACCGTGTACGACCAGGCAGCGCTGAAACTCAAAGGTCCTAACGCCGTGACGAACTTCCCTAACGCCGTGATAACGGAGACCCCTACAGTTTACACCTCGAGTGCAGATTCTTTTGCCACTTCTGAAGCGGGAGTGGCTGCCTCTTCCCCAACGTCAGTCCTCCGTTACGAAGACAGGTTGACGCCGCTTGATGGTCTGGGTTACGGTGATGTCGACGCATTCGGTTTCCGCATCGACTTGCCGTTAAGTTGGCCTGAAGTGCTCATGCCTGGTCAGTGTTCTAGCGAAGACTTTGGCGAGTTCGACATTGACGAGTTCTTAGCGGACGTCTCACCATGA 840 0.5024 MSVQTTVKLSELVIVKQQQSLIPSTEMETEYTPVVCSPKRKGQLKLVRIVVTDADATDSSSDENEELKRPIRRSKRHVKEISLELPSTDSATPSFTSSSTLSSNSSVQNQQKKQRTPVRVSRRIASRCHKFRGVRQRPWGRWAAEIRDPIRRKRVWLGTFDTAEEAATVYDQAALKLKGPNAVTNFPNAVITETPTVYTSSADSFATSEAGVAASSPTSVLRYEDRLTPLDGLGYGDVDAFGFRIDLPLSWPEVLMPGQCSSEDFGEFDIDEFLADVSP* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g01213 279 CDD AP2 130 189 IPR001471 GO:0003700|GO:0006355
Pte19g01213 279 FunFam Ethylene-responsive transcription factor 2 129 188 - -
Pte19g01213 279 MobiDBLite consensus disorder prediction 78 122 - -
Pte19g01213 279 PRINTS Ethylene responsive element binding protein signature 131 142 IPR001471 GO:0003700|GO:0006355
Pte19g01213 279 PRINTS Ethylene responsive element binding protein signature 153 169 IPR001471 GO:0003700|GO:0006355
Pte19g01213 279 MobiDBLite consensus disorder prediction 85 115 - -
Pte19g01213 279 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 45 223 - -
Pte19g01213 279 SMART rav1_2 130 193 IPR001471 GO:0003700|GO:0006355
Pte19g01213 279 ProSiteProfiles AP2/ERF domain profile. 130 187 IPR001471 GO:0003700|GO:0006355
Pte19g01213 279 Pfam AP2 domain 130 179 IPR001471 GO:0003700|GO:0006355
Pte19g01213 279 SUPERFAMILY DNA-binding domain 130 188 IPR016177 GO:0003677
Pte19g01213 279 Gene3D AP2/ERF domain 129 189 IPR036955 GO:0003700|GO:0006355
Pte19g01213 279 PIRSF PTI6 16 278 IPR017392 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g01213 Pte-Chr19 22333195 22334467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g01213 45 233 AP2-EREBP Transcription Factor Family AT4G27950 44.670 7.45e-41 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte19g01213 AP2 1e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g01213 K13434 - qsa:O6P43_035061 251.136