Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g01193 ATGTTAGACAACACGGGTCGTGATTCGATTTCAACACAGAGCAGTACTTCGAGTTCTTCAATGGGTAGTGAAAGCCTTTGCAGTAGTAGTTTCAGTCGTCTCTCTTTTGATTTCCATCCCAGTACTTCACCAGAAACCTTCGTTTTAAAACCACACCGGTCGTCTGACTTTGCTTACTCCGCTGTGTTCCACCGCAAAACCAACCTCACCTTCCGCGACTTCCGTCTTCTTCGCCGTATTGGTGCTGGTGATATCGGCACTGTCTATCTCTGCCGTCTCCGAAACTCAACCGCCCCCGACCCTGAGTACGAGCCTGACAACTCTTGCTTCTACGCCATGAAAGTCGTTGACAAAGAAGCTTTGGCTCTGAAGAAAAAAGTTCCCAGAGCTGAGATGGAAAGGAAGATTCTCAAGATGTTAGACCATCCCTTTTTGCCTACGCTGTTTGCCGAGTTTGAAGCTTCACATTTCTCTTGCATTGTCATGGAGTTTTGTCCTGGAGGTGACTTGCATTCTCTCAGACACAAGCAGCTTCACCGTCGTTTCTCTCTCACCTCTGCAAGGTTTTATGCTGCTGAGGTGTTGGTGGCATTAGAGTACCTGCACATGTTAGGAATCATATACAGAGACTTAAAGCCTGAAAATGTGCTAGTCAGATCAGACGGCCACATCATGCTCTCAGATTTTGATCTATCTTTATGCTCAGATGCTATCCCAGCCGTTGAATGGCCAGATTCCTCTCCAGATCCCGCATTCCCATCTACGCTGCCGTACAACCAGCCGCAGGCTAACTCTCGCTTCTCCTGCCTCGCTAGGCGCTTCAAGTTCCGGTCCCGTAAAGTGCAGACCCTCCAACCCAACCGGCTCTTTGTAGCGGAACCGGTTGATGCCCGATCTTGCTCATTCGTTGGGACCCACGAGTACGTCTCCCCTGAAGTCGCCTCCGGTAGGTCCCACGGCAATGCAGTGGATTGGTGGTCGTTTGGGATCTTTATCTACGAGATGATCTATGGCCGTACACCATTTGCAGCCTCATCGAATGAAGCTACACTGCGTAACGTCATAAAACAACCCGTGAACTTTCCTACTCCATCTCCATCCTGCTCGCTTGAACAACACGCGCGAGACCTCATCACCGCGTTGTTAAACAAGGATCCGAGTAGAAGACTCGGGTCGAAACGTGGAGCGGCCGAAATCAAGTCGCACCCGTTTTTTAAAGGACTCAACTTTGCGCTCGTACGGACGCTGACGCCACCTGAAGTGCCGGTTTTGAGGAGGCTTAAAACGACGCCGGTACCGTTTAGTAGTGCCATGAATAATAGTAGTGATGGAAACAGTATAAGGAAATCAACGGCCTTTGATTGCTTTTGA 1371 0.496 MLDNTGRDSISTQSSTSSSSMGSESLCSSSFSRLSFDFHPSTSPETFVLKPHRSSDFAYSAVFHRKTNLTFRDFRLLRRIGAGDIGTVYLCRLRNSTAPDPEYEPDNSCFYAMKVVDKEALALKKKVPRAEMERKILKMLDHPFLPTLFAEFEASHFSCIVMEFCPGGDLHSLRHKQLHRRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSDAIPAVEWPDSSPDPAFPSTLPYNQPQANSRFSCLARRFKFRSRKVQTLQPNRLFVAEPVDARSCSFVGTHEYVSPEVASGRSHGNAVDWWSFGIFIYEMIYGRTPFAASSNEATLRNVIKQPVNFPTPSPSCSLEQHARDLITALLNKDPSRRLGSKRGAAEIKSHPFFKGLNFALVRTLTPPEVPVLRRLKTTPVPFSSAMNNSSDGNSIRKSTAFDCF* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g01193 456 PANTHER FLIPPASE KINASE 1-RELATED 15 425 - -
Pte19g01193 456 Gene3D Phosphorylase Kinase; domain 1 72 164 - -
Pte19g01193 456 Gene3D Transferase(Phosphotransferase) domain 1 296 423 - -
Pte19g01193 456 SMART serkin_6 74 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte19g01193 456 MobiDBLite consensus disorder prediction 1 23 - -
Pte19g01193 456 MobiDBLite consensus disorder prediction 435 456 - -
Pte19g01193 456 FunFam protein kinase PINOID 2 72 164 - -
Pte19g01193 456 ProSiteProfiles Protein kinase domain profile. 74 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte19g01193 456 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Pte19g01193 456 CDD STKc_phototropin_like 72 426 - -
Pte19g01193 456 MobiDBLite consensus disorder prediction 435 449 - -
Pte19g01193 456 FunFam protein kinase PINOID 165 233 - -
Pte19g01193 456 FunFam serine/threonine-protein kinase D6PK-like 297 423 - -
Pte19g01193 456 Gene3D Transferase(Phosphotransferase) domain 1 165 232 - -
Pte19g01193 456 SUPERFAMILY Protein kinase-like (PK-like) 56 436 IPR011009 -
Pte19g01193 456 Pfam Protein kinase domain 300 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte19g01193 456 Pfam Protein kinase domain 75 232 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g01193 Pte-Chr19 17984715 17987218 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g01193 3 457 AGC Kinase Gene Family AT2G34650 67.028 0.0 587
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pte19g01193 Pkinase 1.4e-30 CL0016