Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g01181 ATGCAGCAAGGTGATCAAACGGTGCTGAGTTTGAGACCTGGTGGTGGTCGAGGCGGCGGCGGTGGAAACAGACTTTTCGGTTCTCGATTAGATTTTTCATCCTCTTCAGCCTCATCAGCTGCTCCTGTTTTTGGTTCCTTTTCATCTGACGTCCTAGCATTTCGTCGTGGTGGTGCTCCATCTACTTATTCTGCGAAGAATGGAGACTTACATTTTGAGGGTCATGAGCGCGTGCAATACACCCGGGACCAACTGTTACAGCTTAGAGAGGTCACTGAAATCTCTGATGATATTCTAAAAATCAAACTCGAAATTGAAACTGAACTTTTTGGTGAAGGGCACAGTTGGAATCGAGCTGAAAACACTTCTCCAAATCAATTCCAAAACCGTTATTCTGAGCCTGATAATCGTGACTGGCACGGCCGATCTGCACAAACTCCTGCCTCTGTGGAAGAGAGATCTTGGGAATCTCTGAGAGAGAACAGAGAGGCAGCTGGTCAATTTGATCCAAGGTTGCAAGAGAATAATCCACTGAATTCCCAATTTTCAAGGGCACATATTTCTTCCAACCATGTGGGAGGGCCAGCTCCTACTCTCGTGAAGGCGGAGGTTCCATGGTCTGTTAGGAGGGCGACTCTCTCTGAGAAGGACCGTGTTTTGAAGATTGTTAAGGGGATATTGAATAAGTTGACCCCTGAGAAGTTTGATCTGCTTAAAGGTCAATTAATTGACTCGGGGATTAGCTCAGCTGATATCTTGAAGGGGGTCATTTCCTTGATATTTGACAAAGCTGTGCTGGAACCTACATTTTGTCCCATGTATGCACAATTATGTTTTGACCTTAATGAGAAGCTTCCTCCTTTTCCCTCTGATGAACCTGGTGGGAAGGAAATTACTTTCAAGCGAGTCCTCTTAAATAACTGCCAAGAGGCTTTTGAAGGTGCTGATCAAATGAGAGAAGAATTGAGGCTGATGACTGCCCCTGATCAGGAGATGGAGCAGAGAGACAAAGAACGGCTTTTAAAGCTACGTACACTTGGAAACATCCGTTTGATTGGTGAGCTGTTGAAGCAGAAGATGGTGACTGAAAAGATCGTCCATCACATTGTGCAGGAACTTTTAGGTCAACCAGATAGCAAGACCTGTCCTGCTGAAGAGAATGTGGAAGCCATTTGTCAGTTTTTCAACACTATTGGTAAGCAGCTTGATGAAAGCCCAAAGTCTCGTCGCATAAATGATATGTACTTTAGCCGATTGAAGCAATTAAGTACGCACTCCCAGCTTGCCCCACGTTTGAGGTTTATGCTTCGGGATGTTTTAGATTTGCGATCAAACAACTGGGTTCCGAGACGTGAAGAGGTGAAAGCCAAAACTATTACAGAAATTCATTCTGAGGCAGAAAAGAACTTGGGCTTGCGACCTGGAGCCACTGCTAGCATAAGAAATAATCGTGGTCCTGGCGTACAAGTTAACACTGGGCCAAGTGGATTCCCCATTGCTATGCCTGGGGCTGGTGGTTTGATGCCTGGTATGCCTGGGACCAGGAAGATGCCCGGGATGCCTGGCATGGATAATGACAACTGGGAAATGCCCAGAACTAGGTCCATCCCAAGGGGTGATAATCATGCGTTCCAGGCTGCTGGACGTGGCCTGTCACCTTTAATGAGTAGGACACCATCACTGAATTCAAAGCTCTTGCCTCAAGGTAGTGCTGGTCTTAATAGTGTAAGGAGTAGTGCTCTGTTGCAAGAGAGTGCTTTACCTTCTGGTCGACCAAGTTTGGGTGACTATGATAATGAGGCTTCACCTCACTTTTCTGTACCTGCCAATCCAATTCCTACAACAGCATCCTTTGTTCCAGCTCCAGAAAAATTGCAGGCTCCAACTCCAAGGTTGAAACTTGAAGATCTTCGCGGGAAGACTGTCTCTCTTCTGGAAGAATACTTCAGCATTCGGTTGCTGGATGAGGCATTGCAATGTGTGCAGGAGCTAAGTTCGCCGAGTTACCATCCAGAGGTTGTGAAGGAAGCTATTTCTCTTGCACTCGAAAAAAATCCACCATGTACTGAACCTGTAGCTAATTTTCTGGAGTATCTTTTCATAAAACAGATTTTTACAGCTAGTGACATTGGAACTGGATGTCTACTTTACGGTTCAATGTTGGATGACATCGCCATTGATTTACCTAAAGCACCTAGCAATTTTGGTGAGATTGTCGGACAATTAATACTGGCTGCAGGATTGGACTTCAAGGTGGTGAAGGAGATCCTTTCAAAGCTAGAAGATGACAGAACCCAGAAAGCAATGTTTGATGCAGCCATCAGGACAATCAGTGCTGTATCAGAACAAGGTATCTTGGACTTACAAGCATCTGACATTGAAGCCTGTCGAAGCCTTTGGGGCACAGAAGTATTGAAACCTCCAGAATTTTTACAGGCCAACTGGAGCTCCTAG 2454 0.4548 MQQGDQTVLSLRPGGGRGGGGGNRLFGSRLDFSSSSASSAAPVFGSFSSDVLAFRRGGAPSTYSAKNGDLHFEGHERVQYTRDQLLQLREVTEISDDILKIKLEIETELFGEGHSWNRAENTSPNQFQNRYSEPDNRDWHGRSAQTPASVEERSWESLRENREAAGQFDPRLQENNPLNSQFSRAHISSNHVGGPAPTLVKAEVPWSVRRATLSEKDRVLKIVKGILNKLTPEKFDLLKGQLIDSGISSADILKGVISLIFDKAVLEPTFCPMYAQLCFDLNEKLPPFPSDEPGGKEITFKRVLLNNCQEAFEGADQMREELRLMTAPDQEMEQRDKERLLKLRTLGNIRLIGELLKQKMVTEKIVHHIVQELLGQPDSKTCPAEENVEAICQFFNTIGKQLDESPKSRRINDMYFSRLKQLSTHSQLAPRLRFMLRDVLDLRSNNWVPRREEVKAKTITEIHSEAEKNLGLRPGATASIRNNRGPGVQVNTGPSGFPIAMPGAGGLMPGMPGTRKMPGMPGMDNDNWEMPRTRSIPRGDNHAFQAAGRGLSPLMSRTPSLNSKLLPQGSAGLNSVRSSALLQESALPSGRPSLGDYDNEASPHFSVPANPIPTTASFVPAPEKLQAPTPRLKLEDLRGKTVSLLEEYFSIRLLDEALQCVQELSSPSYHPEVVKEAISLALEKNPPCTEPVANFLEYLFIKQIFTASDIGTGCLLYGSMLDDIAIDLPKAPSNFGEIVGQLILAAGLDFKVVKEILSKLEDDRTQKAMFDAAIRTISAVSEQGILDLQASDIEACRSLWGTEVLKPPEFLQANWSS* 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g01181 817 Pfam MA3 domain 637 749 IPR003891 -
Pte19g01181 817 FunFam Eukaryotic translation initiation factor isoform 4G-2 211 447 - -
Pte19g01181 817 ProSiteProfiles MI domain profile. 636 758 IPR003891 -
Pte19g01181 817 MobiDBLite consensus disorder prediction 115 154 - -
Pte19g01181 817 Gene3D - 630 814 - -
Pte19g01181 817 SUPERFAMILY ARM repeat 630 777 IPR016024 -
Pte19g01181 817 SUPERFAMILY ARM repeat 213 449 IPR016024 -
Pte19g01181 817 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 66 783 IPR045208 GO:0003743
Pte19g01181 817 Pfam MIF4G domain 220 446 IPR003890 GO:0003723|GO:0005515
Pte19g01181 817 SMART if4_15 220 446 IPR003890 GO:0003723|GO:0005515
Pte19g01181 817 MobiDBLite consensus disorder prediction 116 132 - -
Pte19g01181 817 MobiDBLite consensus disorder prediction 1 23 - -
Pte19g01181 817 Gene3D - 221 459 - -
Pte19g01181 817 SMART ma3_7 637 749 IPR003891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g01181 Pte-Chr19 15718923 15724886 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g01181 1 799 Eukaryotic Initiation Factors Gene Family AT5G57870 63.041 0.0 927
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g01181 K03260 - qsa:O6P43_022212 1146.72