Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g01174 ATGTTGTTTCATCCAACCATGGACAATTACCAAGGTGATCTAAATGATATTGTGCGAGAAACTAGTGTTGGAGAAGTTGTCTTTGGAAGTGGCACACCCTCATCAGATGCTACTGTATCTGATCATTACTGGAACTTCTGTACTGATCATCCAATTAACTACTCAGCAGTTTTGGAAAACAACAGTGGAGAAAAGTTTGCTGATCCTTTCTCAAACACCAGATTAAATCCTTACCTTCATCACCTTCATGCATCTCCTTCATGCTTGTATAATGTTAGCGATTCGGTTTCTGCAGAAACTGTCCGTAGTTGTACTGCAACAGGTGTAAAAGACTCGACTGATTTTGGTATATATGTCTCTGGTAGTAATTGTGATGCTGGTGTTCTAGCTCAGAAAATTAACATAGATGATGAAATGAAGAAACCTTGGAACTTGCTCTCTCAGATGATTCCGATCTCGTCAAGCAACACAAAGCTTCCCTTCTCTCCATGCGATCCGCCGGCCATGGCTGCTTACCCTAAGACTTGCTTGGTTGATAAAACAGGTGTGCAGATCTCGTCACCACGAAATCCGGGTCTTAAAAGAAAAAGTCAGGCAAAGAAGGTAGTATTTATTCCTGCACCAGCACCTTCAAGCCACAGACCAGGAGGAGAAGTGGTTCCTTCTGACTTGTGGGCATGGAGAAAGTACGGCCAGAAACCCATTAAAGGTTCTCCTTATCCTAGAGGTTATTATCGATGTAGCAGTTCCAAGGGTTGCTCGGCAAGGAAACAAGTGGAGAGGAGCGGGACTGACCCTAACATGTTGGTCATTTCCTATACCTTCGAGCACAATCATCCTCGGCCAACTCACAGAAATTCTCTTGCTGGTTCAAGAAAGTCACAGCCATCAAACAACAATATTATCTCATCCCACCACTCTCACTCCGAAAGGCTCACAAACAAACCTAAACAAGAACAGCATCAGAGTCATGAGCAAAATGACTTGTTTCCTGTCGCTGCAAGTGGAAACCCCAACCCATCGAGAGCATCGGTGGAAGAAGAGATGTGTGACACAGAGAAACAAGTGGAGATAATAGAGGATGATGAAGAATTCAGTGATGGATTCCCTTACAGGCTGCCTACTCTATTGGCTTCCAACCAACCTGAAGTTATGTTTTCTGGGTTTGGCGAGATAGAAACTGACCCTATAAATCTGGTGTTCTCCAATAAAGGTGTCCATGCAGCTGAGCTGATGGAAGTCAAGGGTAGTCACTTCAATCTTTTTGATTAG 1272 0.4363 MLFHPTMDNYQGDLNDIVRETSVGEVVFGSGTPSSDATVSDHYWNFCTDHPINYSAVLENNSGEKFADPFSNTRLNPYLHHLHASPSCLYNVSDSVSAETVRSCTATGVKDSTDFGIYVSGSNCDAGVLAQKINIDDEMKKPWNLLSQMIPISSSNTKLPFSPCDPPAMAAYPKTCLVDKTGVQISSPRNPGLKRKSQAKKVVFIPAPAPSSHRPGGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSGTDPNMLVISYTFEHNHPRPTHRNSLAGSRKSQPSNNNIISSHHSHSERLTNKPKQEQHQSHEQNDLFPVAASGNPNPSRASVEEEMCDTEKQVEIIEDDEEFSDGFPYRLPTLLASNQPEVMFSGFGEIETDPINLVFSNKGVHAAELMEVKGSHFNLFD* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g01174 423 Gene3D WRKY domain 195 275 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte19g01174 423 ProSiteProfiles WRKY domain profile. 216 282 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte19g01174 423 Pfam WRKY DNA -binding domain 223 280 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte19g01174 423 SMART WRKY_cls 221 281 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte19g01174 423 SUPERFAMILY WRKY DNA-binding domain 220 282 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte19g01174 423 FunFam probable WRKY transcription factor 14 195 275 - -
Pte19g01174 423 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 114 401 IPR044810 GO:0003700
Pte19g01174 423 MobiDBLite consensus disorder prediction 325 342 - -
Pte19g01174 423 MobiDBLite consensus disorder prediction 284 307 - -
Pte19g01174 423 MobiDBLite consensus disorder prediction 276 346 - -
Pte19g01174 423 MobiDBLite consensus disorder prediction 308 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g01174 Pte-Chr19 15466227 15468578 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g01174 7 402 WRKY Transcription Factor Family AT1G30650 39.336 4.04e-67 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte19g01174 WRKY 1.4e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g01174 - - csin:114273668 356.295