Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g01163 ATGGAGATTTCCATAGTGTCTGAAGAATACATCATGCCTTCTTCCCCAACTCGTCACTGCCTAAGGACGCATTTAATGTCCTTCTTAGACCAGGTTTATTCCCCCAGCCCGGTGTGTATCATACTTTTCTACCCAGCAGGTGTTGATATCAGCACTTGTGAGATCAATGTTGATGATATTTTCAAGAAAAGATTAGGGTTATTGAAGCAATCACTGTCAAAAACATTGTCTAGATTCTATCCACTGGCCGGAAGACTTAAAGACGAGATCTCCATTGACTGCACTGACGAGGGAGTCTATTTCGTTGAGGCCCATGTCAAGTCAACCCTATCTGAGGTTCTCCAACAACCCCAGTTGTTTCACAATTTGGAACCTGGTGGAGTAGAAACCACAAGTTTGCCGACAAATAACATTGCTATGGTACAAGTAACGCGCTTTGCGTGTGGTGGCATGGCAATTTCTGCTTCGATTTCTCATAAAATAGTTGATGCTTCTGCACTTAGCTTTTTCCTTAGAAGTTGGACTGCCGCGGCTAGTGATGATAGCGAAATAGCTGTTCCAGATTTTGCTGGGTCGACCCGTTTTCCAATAACTGATGTTATTCCAGACCCTACAGCTCTGGTACCACCTTTAATCTTCAAAACAGGTAGATCTGTTACGAAGAGATTTAGGTTTGATGCTGAAGCAATCGCTGCACTTAAAGCAAAATCATGTAGCTCCAGATGCAAGCAAAAGCCTTCTCGAGTTGAAGCCGTATCAGCTCTCTTATGTAAATCCGTTTCAGCTGCAATGAAAGCCAGATCTGGCACAGCGAGTCGAATGATCAGTCATCATTCAGTGAATCTACGTCGTCGAGCTATGCCTCCATTGCCAGAGTCATGCATGGGAAATTATGTGTGTGTGGCACCTGCAATATTGGGCATTGTAGATGAAAATACCGAGCTTTCAGATTTGGTGATTAAACTGAGGGAAGCAATAACCATGACCTATCATTCAGATTTTATCAAGTGTCTGGAAAGTGAACCTACGAAATTGCTTGATATCGTCAAAGAGATGGAGGTTGCAGCTGGTACTGTTCATGGTTCAAACATGAAAACTGAATTTATTGCATTTAACAGTTGGTGTAACTTGGGATTTTATGATGTTGACTTTGGATGGGGAAAGCCCCTTTTGGTTATGCACATGCAGTGCCTTAATGATTTTGGCAACACTTGCGTGAATCTTGTGTTTTTTATAGATACAAGATCCAAAGAGGAAGTGGAGGCCTGGATAGCTTTAGATCGAGAAGTTATGGCGTTTCTGGAAAAAGACAAGGAATTCAATGCATTTGCTACTTTGGAATCCGTGAGTCTATGA 1356 0.4233 MEISIVSEEYIMPSSPTRHCLRTHLMSFLDQVYSPSPVCIILFYPAGVDISTCEINVDDIFKKRLGLLKQSLSKTLSRFYPLAGRLKDEISIDCTDEGVYFVEAHVKSTLSEVLQQPQLFHNLEPGGVETTSLPTNNIAMVQVTRFACGGMAISASISHKIVDASALSFFLRSWTAAASDDSEIAVPDFAGSTRFPITDVIPDPTALVPPLIFKTGRSVTKRFRFDAEAIAALKAKSCSSRCKQKPSRVEAVSALLCKSVSAAMKARSGTASRMISHHSVNLRRRAMPPLPESCMGNYVCVAPAILGIVDENTELSDLVIKLREAITMTYHSDFIKCLESEPTKLLDIVKEMEVAAGTVHGSNMKTEFIAFNSWCNLGFYDVDFGWGKPLLVMHMQCLNDFGNTCVNLVFFIDTRSKEEVEAWIALDREVMAFLEKDKEFNAFATLESVSL* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g01163 451 PANTHER F21J9.9 4 444 - -
Pte19g01163 451 Pfam Transferase family 2 440 - -
Pte19g01163 451 Gene3D - 217 442 IPR023213 -
Pte19g01163 451 Gene3D - 1 206 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g01163 Pte-Chr19 15115304 15116762 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g01163 67 436 Monolignol Biosynthesis Gene Families AT5G48930 25.128 1.20e-24 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g01163 - - pvy:116112663 350.903