Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g01157 ATGTCAAATCGTGGGTCAACGAGTCACAGTAGGACCCGTGTGGGAAAATACGAACTGGGTCGGACCTTGGGTGAGGGTAATTTTGCAAAGGTGAAGTTTGCTAGGAATGTTGAGACGGGTGATTATGTTGCCATCAAAATACTTGACAAGGAAAAAGTTCTCAAGCACAAGATGGTTGGTCAGATAAAACGTGAGATTTCAACCATGAAGCTCATTAGACATCCAAATGTTATTCGCATGTACGAGGTGATGGCAAGCAAGACGAAAATTTACATTGTTTTGGAGTTTGTGACGGGTGGAGAATTATTTGACAAAATTGCCACCAAAGGTAGGTTAAAAGAAGATGAAGTAAGGAAATATTTTCAACAACTAATAAATGCAGTGGACTATTGTCATAGTAGAGGTGTTTTCCACCGAGACCTAAAGCCTGAGAATCTGTTGCTGGATGCCAATGGAGTACTGAAAGTGTCAGATTTTGGATTAAGTGCTCTAGCTCAGCAAGTTCGAGAAGATGGATTGCTCCACACAACATGTGGAACACCAAATTATGTTGCCCCGGAGGTCATCCACAACAAGGGCTACGATGGTGCAAAAGCTGATTTGTGGTCCTGTGGTGTAATTTTGTATGTTCTAATGGCTGGTTATTTACCTTTTGAAGATTCTAACCTCATGCAATTATATAAGAAGATTTTTAAGGCCGAATTTACTTGTCCTCCATGGTTCTCTTCAAGTGCAAAGAAGCTAATACACCGAATCCTAGACCCAAATCCAGCAACACGAATTACTTTTGCTGAGGTCATCCAGAATGAATGGTTTAGAAAAGGTTACAAGCCTCCTAGTTTTGAGCAAGCTGATGTTAGTCTTGATGATGTTGATGCTATCTTTAATGAAACAGCGGACTCTAGCAACCTTGTAGTGGAGAGGCGAGAGGAGGGCTCTGTGGCTCCTGTCACCATGAATGCATTTGAGCTCATATCTACATCCCAGGGTCTCAACTTGAGTAGTCTTTTTGAGAAGCAAATGGGACTTGTTAAAAGGGGAACAAGATTCATTTCCAAAAGTTCTGCTAGTGAGATCATTTCAAGGATTGAGCAAGCTGCAGGTCCCCTAGGTTTTGACGTCAAGAAAAATAATTACAAGATGAAGCTTCAAGGGGAAAAGACTGGACGTAAAGGTCATTTGGCGGTGGCAACTGAGATATTTGAGGTAGCCCCCTCACTCTACATCGTTGAGCTTCGGAAGTCTGGAGGAGATACTTTGGAGTTTCACAAGTTTTACAAGAAGCTCTCTACTGGCCTGAAGGACATTGTCTGGAAAGCAGAAGCAATTGATGAAGAAAAAGACAGTTAG 1350 0.4193 MSNRGSTSHSRTRVGKYELGRTLGEGNFAKVKFARNVETGDYVAIKILDKEKVLKHKMVGQIKREISTMKLIRHPNVIRMYEVMASKTKIYIVLEFVTGGELFDKIATKGRLKEDEVRKYFQQLINAVDYCHSRGVFHRDLKPENLLLDANGVLKVSDFGLSALAQQVREDGLLHTTCGTPNYVAPEVIHNKGYDGAKADLWSCGVILYVLMAGYLPFEDSNLMQLYKKIFKAEFTCPPWFSSSAKKLIHRILDPNPATRITFAEVIQNEWFRKGYKPPSFEQADVSLDDVDAIFNETADSSNLVVERREEGSVAPVTMNAFELISTSQGLNLSSLFEKQMGLVKRGTRFISKSSASEIISRIEQAAGPLGFDVKKNNYKMKLQGEKTGRKGHLAVATEIFEVAPSLYIVELRKSGGDTLEFHKFYKKLSTGLKDIVWKAEAIDEEKDS* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g01157 449 Pfam Protein kinase domain 17 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte19g01157 449 Gene3D Transferase(Phosphotransferase) domain 1 97 279 - -
Pte19g01157 449 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 12 431 - -
Pte19g01157 449 CDD STKc_SnRK3 16 271 - -
Pte19g01157 449 ProSiteProfiles Protein kinase domain profile. 17 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte19g01157 449 SMART serkin_6 17 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte19g01157 449 FunFam Non-specific serine/threonine protein kinase 313 439 - -
Pte19g01157 449 FunFam Non-specific serine/threonine protein kinase 10 313 - -
Pte19g01157 449 FunFam Non-specific serine/threonine protein kinase 8 96 - -
Pte19g01157 449 ProSitePatterns Protein kinases ATP-binding region signature. 23 46 IPR017441 GO:0005524
Pte19g01157 449 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Pte19g01157 449 CDD CIPK_C 320 435 - -
Pte19g01157 449 ProSiteProfiles NAF domain profile. 314 338 IPR018451 GO:0007165
Pte19g01157 449 Gene3D Phosphorylase Kinase; domain 1 6 96 - -
Pte19g01157 449 Pfam NAF domain 316 376 IPR004041 GO:0007165
Pte19g01157 449 Gene3D Kinase associated domain 1, KA1 314 439 - -
Pte19g01157 449 SUPERFAMILY Protein kinase-like (PK-like) 14 284 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g01157 Pte-Chr19 14940069 14947558 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g01157 2 447 CBL-interacting serine-threonine protein kinases AT1G01140 69.912 0.0 677
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pte19g01157 Pkinase 1.3e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g01157 - - qsa:O6P43_013013 786.563