Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g01154 ATGATACTTCAGGTACTAGACGCAAAGGCACTACTAGAAAGTGTACATGTTGTGCCAGTACAGGAGGGCTATGTGCCTTTAGGAACATCAACTACAACAACACCATGTGGGGCTTGCAAGTTCTTGAGAAGGAAATGCATTACTGGTTGTATATTTGTACCCTACTTTGCTCCGGACCAAGGTGCTGCTAGATTTGCAATAGTGCACAGGATATTTGGTGCTAGTAATATGTGTCCAAGCTTTTGTTGCATATCTCGGTAA 261 0.4291 MILQVLDAKALLESVHVVPVQEGYVPLGTSTTTTPCGACKFLRRKCITGCIFVPYFAPDQGAARFAIVHRIFGASNMCPSFCCISR* 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g01154 86 ProSiteProfiles LOB domain profile. 34 86 IPR004883 -
Pte19g01154 86 PANTHER LOB DOMAIN CONTAINING PROTEIN 32 77 - -
Pte19g01154 86 Pfam Lateral organ boundaries (LOB) domain 35 78 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g01154 Pte-Chr19 14798079 14799021 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g01154 34 78 AS2 family AT3G03760 73.333 5.09e-22 84.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pte19g01154 LOB 2.3e-13 No_clan