Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g01150 ATGGAGATGGAGGAAATTCAAGGGCAAGCATGTAAGTTCGCAAGAGTTGGAAACAGCAGAAATGAGTCTGGCAAGATAGGATCAAACGGGGGTGAGCATTTCGTCCCTTGTGATGAAGAAGATGGCGAGCTCAAAAGGGTTGGTGGCTTAGTTGATGGTGGAGCTAATAGGCTTCGTGGTTGGCACCATTCTTCAAGAATCATTAGGGTTTCAAGAGCTTCTGGTGGCAAAGATCGGCACAGTAAGGTCTGGACTTCAAAGGGTCTAAGAGACAGAAGGGTTAGGCTGTCTGTAACTACAGCTATTCAGTTCTATGATCTTCAAGATCGGCTTGGTTATGACCAACCAAGCAAAGCTGTGGAATGGCTTATTAAGAAAGCTGCTGATGCCATCGCTGAGCTTCCTTCTCTCAACAATCCCTTCCCGGACACTCTAAATCAACAAATTGATGAGAAAAGAGGTAGTTCGGAAACTGAACATCGGTTCGATTCAGCTGATGGCGAGCTAGATGGTGAGTCAAATTACCAGCAGAATCAATGCCAGCACCTTTCTTTGTCCAAGTCTGCTTGTAGCAGCACTTCAGAGAATAGCAAAGGTTCAAATCTGTCTCTCTCCAAACCTGACAGTCGCGTTCAGCGTGTCAAGGCTCGCGAGCGAGCCAGGGAGAGAACAGCAAAGGAGAAGGAGAAAGAGAAGGATTCCCGCATTGCCCACCATCGGAACGTCAACCCTACTTCTCAAAATGCTTCCTTTACGGAGTTACTCACTTGTGGAATTGGCAATGTGAACAACAACAATGCAACTGGCGCTGCAGCTAGTACCAGTCCCAGTAATTCTATTCATCAAAGCAAGCCGGCTAATTTGTTTCACAAAGCTGCAAGACAATGGCCTTCAACACCACTGGATTACTTCAGCTCTGGTCTATTAGGGCCATCCTCTTCAACAACCCATCAGTCTTCTGGATTCTCAGGTTTGGGAAATTCACTTGGTCAAACATTGTCGGTCTCGCCCTATAATGTCAATGCTGCTGAGAATCAATCAGATCAGCTACAGCATTTCTCTTTGGTTCCAGACCATCTAATACCCGTGGTGTCTTCACAACCCAGTGGAGGCGAATATAATCTTAACTTCTCAATCTCTTCATCAGGCCTCGCTGGTTTCAATAGGGGGACCCTTCAGTCCAATTCTCCACATTTCTTGCCTCATGTCCAGAGGTATACGCCATTAGATGGATCCAATGTACCCTTCTTCATTGGAGCTGCTGCTCCGTCAATGGACAACAATCACCATCCTCAGTTTCCACCTGGATATGATGGCCGTTTGCAGCTCTACTATGGCGACGGAGGTGGCCATCATTCAGACCAGAAGGGCAAAGGAAAGAACTGA 1386 0.4683 MEMEEIQGQACKFARVGNSRNESGKIGSNGGEHFVPCDEEDGELKRVGGLVDGGANRLRGWHHSSRIIRVSRASGGKDRHSKVWTSKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIKKAADAIAELPSLNNPFPDTLNQQIDEKRGSSETEHRFDSADGELDGESNYQQNQCQHLSLSKSACSSTSENSKGSNLSLSKPDSRVQRVKARERARERTAKEKEKEKDSRIAHHRNVNPTSQNASFTELLTCGIGNVNNNNATGAAASTSPSNSIHQSKPANLFHKAARQWPSTPLDYFSSGLLGPSSSTTHQSSGFSGLGNSLGQTLSVSPYNVNAAENQSDQLQHFSLVPDHLIPVVSSQPSGGEYNLNFSISSSGLAGFNRGTLQSNSPHFLPHVQRYTPLDGSNVPFFIGAAAPSMDNNHHPQFPPGYDGRLQLYYGDGGGHHSDQKGKGKN* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g01150 461 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 59 344 IPR005333 GO:0003700
Pte19g01150 461 MobiDBLite consensus disorder prediction 135 249 - -
Pte19g01150 461 ProSiteProfiles R domain profile. 210 228 IPR017888 -
Pte19g01150 461 MobiDBLite consensus disorder prediction 427 461 - -
Pte19g01150 461 ProSiteProfiles TCP domain profile. 76 134 IPR017887 -
Pte19g01150 461 MobiDBLite consensus disorder prediction 210 239 - -
Pte19g01150 461 MobiDBLite consensus disorder prediction 170 208 - -
Pte19g01150 461 Pfam TCP family transcription factor 75 230 IPR017887 -
Pte19g01150 461 MobiDBLite consensus disorder prediction 150 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g01150 Pte-Chr19 14554313 14560862 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g01150 56 462 TCP Transcription Factor Family AT4G18390 44.804 1.95e-80 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pte19g01150 TCP 1.3e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g01150 - - tcc:18596471 540.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte19g01150 19 14554313 14560862 Pte19g01150 19 14554313 14560862 RCT